Protein–RNA interactions for Protein: J3KQ70

INO80B-WBP1, HCG2039827, isoform CRA_e, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-WBP1J3KQ70 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.29■■□□□ 1.64
INO80B-WBP1J3KQ70 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
INO80B-WBP1J3KQ70 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.29■■□□□ 1.64
INO80B-WBP1J3KQ70 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
INO80B-WBP1J3KQ70 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
INO80B-WBP1J3KQ70 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
INO80B-WBP1J3KQ70 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
INO80B-WBP1J3KQ70 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
INO80B-WBP1J3KQ70 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
INO80B-WBP1J3KQ70 AP003733.4-201ENST00000623785 1697 ntBASIC25.28■■□□□ 1.64
INO80B-WBP1J3KQ70 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
INO80B-WBP1J3KQ70 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
INO80B-WBP1J3KQ70 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.28■■□□□ 1.64
INO80B-WBP1J3KQ70 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
INO80B-WBP1J3KQ70 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 AC138932.3-201ENST00000567634 1902 ntBASIC25.27■■□□□ 1.64
INO80B-WBP1J3KQ70 AC142381.3-201ENST00000568208 1670 ntBASIC25.26■■□□□ 1.63
INO80B-WBP1J3KQ70 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
INO80B-WBP1J3KQ70 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
INO80B-WBP1J3KQ70 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
INO80B-WBP1J3KQ70 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
INO80B-WBP1J3KQ70 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.26■■□□□ 1.63
INO80B-WBP1J3KQ70 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
INO80B-WBP1J3KQ70 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
INO80B-WBP1J3KQ70 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
INO80B-WBP1J3KQ70 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.25■■□□□ 1.63
INO80B-WBP1J3KQ70 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
INO80B-WBP1J3KQ70 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
INO80B-WBP1J3KQ70 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
INO80B-WBP1J3KQ70 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.25■■□□□ 1.63
INO80B-WBP1J3KQ70 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
INO80B-WBP1J3KQ70 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.25■■□□□ 1.63
INO80B-WBP1J3KQ70 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
INO80B-WBP1J3KQ70 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.24■■□□□ 1.63
INO80B-WBP1J3KQ70 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 AC135731.1-201ENST00000569415 2548 ntBASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
INO80B-WBP1J3KQ70 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
INO80B-WBP1J3KQ70 AC005703.6-201ENST00000623265 1329 ntBASIC25.22■■□□□ 1.63
INO80B-WBP1J3KQ70 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
INO80B-WBP1J3KQ70 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.22■■□□□ 1.63
INO80B-WBP1J3KQ70 AL136116.3-201ENST00000402907 1138 ntBASIC25.22■■□□□ 1.63
INO80B-WBP1J3KQ70 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.22■■□□□ 1.63
INO80B-WBP1J3KQ70 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
INO80B-WBP1J3KQ70 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.22■■□□□ 1.63
INO80B-WBP1J3KQ70 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
INO80B-WBP1J3KQ70 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.63
INO80B-WBP1J3KQ70 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
INO80B-WBP1J3KQ70 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
INO80B-WBP1J3KQ70 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms