Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 RP9P-202ENST00000450133 1212 ntBASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-1A0A0B4J241 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-1A0A0B4J241 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-1A0A0B4J241 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-1A0A0B4J241 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV13-1A0A0B4J241 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV13-1A0A0B4J241 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 C9orf163-202ENST00000624034 2573 ntBASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 AC093536.1-201ENST00000569153 554 ntBASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 AC092296.2-201ENST00000589470 999 ntBASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 FOXO3B-201ENST00000395675 1928 ntBASIC15.92■□□□□ 0.14
TRAV13-1A0A0B4J241 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-1A0A0B4J241 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-1A0A0B4J241 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV13-1A0A0B4J241 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-1A0A0B4J241 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-1A0A0B4J241 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-1A0A0B4J241 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV13-1A0A0B4J241 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV13-1A0A0B4J241 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV13-1A0A0B4J241 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 ECEL1P2-201ENST00000461596 1295 ntBASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV13-1A0A0B4J241 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 AC022413.1-201ENST00000624602 984 ntBASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV13-1A0A0B4J241 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 NFE2L3P1-201ENST00000588207 1959 ntBASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV13-1A0A0B4J241 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 CEP120-209ENST00000515110 606 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV13-1A0A0B4J241 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms