Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.98■■■□□ 2.71
CCDC61Q9Y6R9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC61Q9Y6R9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC61Q9Y6R9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
CCDC61Q9Y6R9 AL355001.2-201ENST00000620617 1191 ntBASIC31.98■■■□□ 2.71
CCDC61Q9Y6R9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC61Q9Y6R9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.97■■■□□ 2.71
CCDC61Q9Y6R9 SLC6A10P-202ENST00000431994 2058 ntBASIC31.97■■■□□ 2.71
CCDC61Q9Y6R9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC61Q9Y6R9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC61Q9Y6R9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC61Q9Y6R9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.97■■■□□ 2.71
CCDC61Q9Y6R9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC61Q9Y6R9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC61Q9Y6R9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.96■■■□□ 2.71
CCDC61Q9Y6R9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.96■■■□□ 2.71
CCDC61Q9Y6R9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC61Q9Y6R9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC61Q9Y6R9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.95■■■□□ 2.71
CCDC61Q9Y6R9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC61Q9Y6R9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC61Q9Y6R9 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC61Q9Y6R9 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC61Q9Y6R9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC61Q9Y6R9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.94■■■□□ 2.7
CCDC61Q9Y6R9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC61Q9Y6R9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.93■■■□□ 2.7
CCDC61Q9Y6R9 DUX4L19-201ENST00000557448 1267 ntBASIC31.93■■■□□ 2.7
CCDC61Q9Y6R9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.93■■■□□ 2.7
CCDC61Q9Y6R9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC61Q9Y6R9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC61Q9Y6R9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC61Q9Y6R9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
CCDC61Q9Y6R9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC61Q9Y6R9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC61Q9Y6R9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.92■■■□□ 2.7
CCDC61Q9Y6R9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
CCDC61Q9Y6R9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC61Q9Y6R9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC61Q9Y6R9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC61Q9Y6R9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
CCDC61Q9Y6R9 RARRES2P6-201ENST00000567333 442 ntBASIC31.91■■■□□ 2.7
CCDC61Q9Y6R9 AL136967.2-201ENST00000623968 743 ntBASIC31.91■■■□□ 2.7
CCDC61Q9Y6R9 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC61Q9Y6R9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC61Q9Y6R9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC61Q9Y6R9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC61Q9Y6R9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.9■■■□□ 2.7
CCDC61Q9Y6R9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.9■■■□□ 2.7
CCDC61Q9Y6R9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
CCDC61Q9Y6R9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
CCDC61Q9Y6R9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC61Q9Y6R9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.89■■■□□ 2.7
CCDC61Q9Y6R9 AC026271.2-201ENST00000428091 497 ntBASIC31.89■■■□□ 2.7
CCDC61Q9Y6R9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.89■■■□□ 2.7
CCDC61Q9Y6R9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC61Q9Y6R9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC31.88■■■□□ 2.69
CCDC61Q9Y6R9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC61Q9Y6R9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.88■■■□□ 2.69
CCDC61Q9Y6R9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
CCDC61Q9Y6R9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.87■■■□□ 2.69
CCDC61Q9Y6R9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC61Q9Y6R9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC61Q9Y6R9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.87■■■□□ 2.69
CCDC61Q9Y6R9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC61Q9Y6R9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.87■■■□□ 2.69
CCDC61Q9Y6R9 MIR6089-201ENST00000616698 64 ntBASIC31.87■■■□□ 2.69
CCDC61Q9Y6R9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC61Q9Y6R9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.87■■■□□ 2.69
CCDC61Q9Y6R9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
CCDC61Q9Y6R9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC61Q9Y6R9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CCDC61Q9Y6R9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC61Q9Y6R9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC61Q9Y6R9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC61Q9Y6R9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC61Q9Y6R9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CCDC61Q9Y6R9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC61Q9Y6R9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.85■■■□□ 2.69
CCDC61Q9Y6R9 MIR939-201ENST00000401314 82 ntBASIC31.85■■■□□ 2.69
CCDC61Q9Y6R9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.85■■■□□ 2.69
CCDC61Q9Y6R9 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.85■■■□□ 2.69
CCDC61Q9Y6R9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.85■■■□□ 2.69
CCDC61Q9Y6R9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
CCDC61Q9Y6R9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC61Q9Y6R9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC61Q9Y6R9 AF213884.3-201ENST00000563833 479 ntBASIC31.84■■■□□ 2.69
CCDC61Q9Y6R9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms