Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.67■■□□□ 1.22
CSNK1G3Q9Y6M4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.67■■□□□ 1.22
CSNK1G3Q9Y6M4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.67■■□□□ 1.22
CSNK1G3Q9Y6M4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G3Q9Y6M4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G3Q9Y6M4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSNK1G3Q9Y6M4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.65■■□□□ 1.22
CSNK1G3Q9Y6M4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CSNK1G3Q9Y6M4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CSNK1G3Q9Y6M4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSNK1G3Q9Y6M4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSNK1G3Q9Y6M4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSNK1G3Q9Y6M4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.64■■□□□ 1.22
CSNK1G3Q9Y6M4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CSNK1G3Q9Y6M4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.64■■□□□ 1.22
CSNK1G3Q9Y6M4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CSNK1G3Q9Y6M4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CSNK1G3Q9Y6M4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.64■■□□□ 1.21
CSNK1G3Q9Y6M4 AC106739.1-201ENST00000617035 715 ntBASIC22.64■■□□□ 1.21
CSNK1G3Q9Y6M4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CSNK1G3Q9Y6M4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CSNK1G3Q9Y6M4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
CSNK1G3Q9Y6M4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.63■■□□□ 1.21
CSNK1G3Q9Y6M4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CSNK1G3Q9Y6M4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CSNK1G3Q9Y6M4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 AC005703.6-201ENST00000623265 1329 ntBASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 SRD5A1P1-201ENST00000442297 786 ntBASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
CSNK1G3Q9Y6M4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CSNK1G3Q9Y6M4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CSNK1G3Q9Y6M4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CSNK1G3Q9Y6M4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.6■■□□□ 1.21
CSNK1G3Q9Y6M4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CSNK1G3Q9Y6M4 PBX2P1-201ENST00000493219 1291 ntBASIC22.6■■□□□ 1.21
CSNK1G3Q9Y6M4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.6■■□□□ 1.21
CSNK1G3Q9Y6M4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CSNK1G3Q9Y6M4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CSNK1G3Q9Y6M4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CSNK1G3Q9Y6M4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CSNK1G3Q9Y6M4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.59■■□□□ 1.21
CSNK1G3Q9Y6M4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.59■■□□□ 1.21
CSNK1G3Q9Y6M4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CSNK1G3Q9Y6M4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CSNK1G3Q9Y6M4 AC091060.1-201ENST00000623524 1766 ntBASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.58■■□□□ 1.21
CSNK1G3Q9Y6M4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 UNC93B3-201ENST00000308076 687 ntBASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CSNK1G3Q9Y6M4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.56■■□□□ 1.2
CSNK1G3Q9Y6M4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.55■■□□□ 1.2
CSNK1G3Q9Y6M4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms