Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSFQ9UBX1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSFQ9UBX1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.79■■□□□ 1.08
CTSFQ9UBX1 MIR3621-201ENST00000580529 85 ntBASIC21.79■■□□□ 1.08
CTSFQ9UBX1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.79■■□□□ 1.08
CTSFQ9UBX1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.79■■□□□ 1.08
CTSFQ9UBX1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.79■■□□□ 1.08
CTSFQ9UBX1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.79■■□□□ 1.08
CTSFQ9UBX1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CTSFQ9UBX1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.79■■□□□ 1.08
CTSFQ9UBX1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 AC131281.2-201ENST00000520478 145 ntBASIC21.78■■□□□ 1.08
CTSFQ9UBX1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.78■■□□□ 1.08
CTSFQ9UBX1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 AC004448.1-201ENST00000458332 883 ntBASIC21.77■■□□□ 1.08
CTSFQ9UBX1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 MIR6722-201ENST00000617286 78 ntBASIC21.77■■□□□ 1.08
CTSFQ9UBX1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CTSFQ9UBX1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CTSFQ9UBX1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 AC131274.2-201ENST00000580697 1507 ntBASIC21.76■■□□□ 1.07
CTSFQ9UBX1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 AC022211.4-201ENST00000625094 2161 ntBASIC21.76■■□□□ 1.07
CTSFQ9UBX1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CTSFQ9UBX1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 AL356740.2-201ENST00000601559 647 ntBASIC21.75■■□□□ 1.07
CTSFQ9UBX1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CTSFQ9UBX1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
CTSFQ9UBX1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CTSFQ9UBX1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSFQ9UBX1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSFQ9UBX1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSFQ9UBX1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.74■■□□□ 1.07
CTSFQ9UBX1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.74■■□□□ 1.07
CTSFQ9UBX1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.73■■□□□ 1.07
CTSFQ9UBX1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSFQ9UBX1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSFQ9UBX1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSFQ9UBX1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSFQ9UBX1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSFQ9UBX1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.72■■□□□ 1.07
CTSFQ9UBX1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CTSFQ9UBX1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSFQ9UBX1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSFQ9UBX1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTSFQ9UBX1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.71■■□□□ 1.07
CTSFQ9UBX1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSFQ9UBX1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CTSFQ9UBX1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSFQ9UBX1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSFQ9UBX1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
CTSFQ9UBX1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms