Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 AC018755.3-202ENST00000596210 929 ntBASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 MIR6765-201ENST00000614092 87 ntBASIC24.99■■□□□ 1.59
NUCKS1Q9H1E3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
NUCKS1Q9H1E3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NUCKS1Q9H1E3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.97■■□□□ 1.59
NUCKS1Q9H1E3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NUCKS1Q9H1E3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.97■■□□□ 1.59
NUCKS1Q9H1E3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NUCKS1Q9H1E3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.97■■□□□ 1.59
NUCKS1Q9H1E3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.96■■□□□ 1.59
NUCKS1Q9H1E3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NUCKS1Q9H1E3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
NUCKS1Q9H1E3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
NUCKS1Q9H1E3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.96■■□□□ 1.59
NUCKS1Q9H1E3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.96■■□□□ 1.59
NUCKS1Q9H1E3 AC090877.2-201ENST00000558441 1738 ntBASIC24.95■■□□□ 1.59
NUCKS1Q9H1E3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NUCKS1Q9H1E3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
NUCKS1Q9H1E3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.95■■□□□ 1.58
NUCKS1Q9H1E3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.95■■□□□ 1.58
NUCKS1Q9H1E3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.95■■□□□ 1.58
NUCKS1Q9H1E3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NUCKS1Q9H1E3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
NUCKS1Q9H1E3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.95■■□□□ 1.58
NUCKS1Q9H1E3 AL161729.1-201ENST00000604104 1402 ntBASIC24.95■■□□□ 1.58
NUCKS1Q9H1E3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
NUCKS1Q9H1E3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.94■■□□□ 1.58
NUCKS1Q9H1E3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.94■■□□□ 1.58
NUCKS1Q9H1E3 AC068473.5-201ENST00000616428 2072 ntBASIC24.94■■□□□ 1.58
NUCKS1Q9H1E3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
NUCKS1Q9H1E3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NUCKS1Q9H1E3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NUCKS1Q9H1E3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.94■■□□□ 1.58
NUCKS1Q9H1E3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
NUCKS1Q9H1E3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 AL592295.1-201ENST00000400984 884 ntBASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 AC087393.1-201ENST00000582896 145 ntBASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.93■■□□□ 1.58
NUCKS1Q9H1E3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
NUCKS1Q9H1E3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
NUCKS1Q9H1E3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
NUCKS1Q9H1E3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NUCKS1Q9H1E3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.92■■□□□ 1.58
NUCKS1Q9H1E3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.92■■□□□ 1.58
NUCKS1Q9H1E3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NUCKS1Q9H1E3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NUCKS1Q9H1E3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NUCKS1Q9H1E3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NUCKS1Q9H1E3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NUCKS1Q9H1E3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.9■■□□□ 1.58
NUCKS1Q9H1E3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
NUCKS1Q9H1E3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NUCKS1Q9H1E3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NUCKS1Q9H1E3 AC133561.1-201ENST00000568600 2415 ntBASIC24.9■■□□□ 1.58
NUCKS1Q9H1E3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NUCKS1Q9H1E3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.89■■□□□ 1.58
NUCKS1Q9H1E3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.89■■□□□ 1.58
NUCKS1Q9H1E3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.89■■□□□ 1.58
NUCKS1Q9H1E3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.89■■□□□ 1.57
NUCKS1Q9H1E3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.89■■□□□ 1.57
NUCKS1Q9H1E3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.89■■□□□ 1.57
NUCKS1Q9H1E3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NUCKS1Q9H1E3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms