Protein–RNA interactions for Protein: Q9BZR6

RTN4R, Reticulon-4 receptor, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RQ9BZR6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RTN4RQ9BZR6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4RQ9BZR6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RTN4RQ9BZR6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4RQ9BZR6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4RQ9BZR6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RTN4RQ9BZR6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RTN4RQ9BZR6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RTN4RQ9BZR6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4RQ9BZR6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4RQ9BZR6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4RQ9BZR6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4RQ9BZR6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4RQ9BZR6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.17■□□□□ 0.98
RTN4RQ9BZR6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 LINC00543-201ENST00000567234 1845 ntBASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 AC131274.2-201ENST00000580697 1507 ntBASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 AL035685.1-201ENST00000636663 812 ntBASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 AC093323.1-202ENST00000635031 2045 ntBASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4RQ9BZR6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
RTN4RQ9BZR6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RTN4RQ9BZR6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTN4RQ9BZR6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 AC004812.2-201ENST00000611079 2094 ntBASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.14■□□□□ 0.97
RTN4RQ9BZR6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4RQ9BZR6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4RQ9BZR6 AC021242.3-201ENST00000607598 1377 ntBASIC21.13■□□□□ 0.97
RTN4RQ9BZR6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTN4RQ9BZR6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RTN4RQ9BZR6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.13■□□□□ 0.97
RTN4RQ9BZR6 AC239859.2-201ENST00000444165 318 ntBASIC21.13■□□□□ 0.97
RTN4RQ9BZR6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTN4RQ9BZR6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.12■□□□□ 0.97
RTN4RQ9BZR6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 BX664725.1-201ENST00000438252 379 ntBASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.11■□□□□ 0.97
RTN4RQ9BZR6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN4RQ9BZR6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RTN4RQ9BZR6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RTN4RQ9BZR6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4RQ9BZR6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4RQ9BZR6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4RQ9BZR6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.1■□□□□ 0.97
RTN4RQ9BZR6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTN4RQ9BZR6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 Z92544.1-202ENST00000571933 1220 ntBASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTN4RQ9BZR6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RTN4RQ9BZR6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RTN4RQ9BZR6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.08■□□□□ 0.97
RTN4RQ9BZR6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTN4RQ9BZR6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.08■□□□□ 0.97
RTN4RQ9BZR6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.07■□□□□ 0.96
RTN4RQ9BZR6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTN4RQ9BZR6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms