Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TMEM56Q96MV1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM56Q96MV1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM56Q96MV1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM56Q96MV1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM56Q96MV1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 MIR639-201ENST00000384974 98 ntBASIC18.96■□□□□ 0.63
TMEM56Q96MV1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56Q96MV1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56Q96MV1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 FOXO3B-201ENST00000395675 1928 ntBASIC18.94■□□□□ 0.62
TMEM56Q96MV1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM56Q96MV1 CLDN5-201ENST00000403084 2357 ntBASIC18.93■□□□□ 0.62
TMEM56Q96MV1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 ECEL1P2-201ENST00000461596 1295 ntBASIC18.93■□□□□ 0.62
TMEM56Q96MV1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 AC092296.2-201ENST00000589470 999 ntBASIC18.93■□□□□ 0.62
TMEM56Q96MV1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56Q96MV1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TMEM56Q96MV1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 AC022413.1-201ENST00000624602 984 ntBASIC18.91■□□□□ 0.62
TMEM56Q96MV1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TMEM56Q96MV1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 RP9P-202ENST00000450133 1212 ntBASIC18.9■□□□□ 0.62
TMEM56Q96MV1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TMEM56Q96MV1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TMEM56Q96MV1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM56Q96MV1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.89■□□□□ 0.61
TMEM56Q96MV1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM56Q96MV1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TMEM56Q96MV1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM56Q96MV1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms