Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAI1Q7Z5J4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAI1Q7Z5J4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.9■□□□□ 0.78
RAI1Q7Z5J4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
RAI1Q7Z5J4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
RAI1Q7Z5J4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.89■□□□□ 0.77
RAI1Q7Z5J4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI1Q7Z5J4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAI1Q7Z5J4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAI1Q7Z5J4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAI1Q7Z5J4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.87■□□□□ 0.77
RAI1Q7Z5J4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAI1Q7Z5J4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.87■□□□□ 0.77
RAI1Q7Z5J4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAI1Q7Z5J4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAI1Q7Z5J4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAI1Q7Z5J4 AC026271.2-201ENST00000428091 497 ntBASIC19.86■□□□□ 0.77
RAI1Q7Z5J4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAI1Q7Z5J4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
RAI1Q7Z5J4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAI1Q7Z5J4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RAI1Q7Z5J4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAI1Q7Z5J4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.86■□□□□ 0.77
RAI1Q7Z5J4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAI1Q7Z5J4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAI1Q7Z5J4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAI1Q7Z5J4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
RAI1Q7Z5J4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAI1Q7Z5J4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RAI1Q7Z5J4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAI1Q7Z5J4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAI1Q7Z5J4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.85■□□□□ 0.77
RAI1Q7Z5J4 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.85■□□□□ 0.77
RAI1Q7Z5J4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAI1Q7Z5J4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.84■□□□□ 0.77
RAI1Q7Z5J4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.84■□□□□ 0.77
RAI1Q7Z5J4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.84■□□□□ 0.77
RAI1Q7Z5J4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RAI1Q7Z5J4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.84■□□□□ 0.77
RAI1Q7Z5J4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAI1Q7Z5J4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.84■□□□□ 0.77
RAI1Q7Z5J4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAI1Q7Z5J4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAI1Q7Z5J4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
RAI1Q7Z5J4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.83■□□□□ 0.77
RAI1Q7Z5J4 AC020928.2-201ENST00000588717 2197 ntBASIC19.83■□□□□ 0.76
RAI1Q7Z5J4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RAI1Q7Z5J4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 AC135279.3-201ENST00000610945 1311 ntBASIC19.82■□□□□ 0.76
RAI1Q7Z5J4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 PBX2P1-201ENST00000493219 1291 ntBASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 AC024257.2-201ENST00000549699 147 ntBASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAI1Q7Z5J4 UNC93B3-201ENST00000308076 687 ntBASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 AC131274.2-201ENST00000580697 1507 ntBASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 AC004448.1-201ENST00000458332 883 ntBASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAI1Q7Z5J4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms