Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNAI3Q3KNW1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.05■□□□□ 0.8
SNAI3Q3KNW1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNAI3Q3KNW1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNAI3Q3KNW1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAI3Q3KNW1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SNAI3Q3KNW1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNAI3Q3KNW1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNAI3Q3KNW1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
SNAI3Q3KNW1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.03■□□□□ 0.8
SNAI3Q3KNW1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAI3Q3KNW1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNAI3Q3KNW1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 AC120024.1-201ENST00000562672 995 ntBASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SNAI3Q3KNW1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNAI3Q3KNW1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNAI3Q3KNW1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNAI3Q3KNW1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNAI3Q3KNW1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SNAI3Q3KNW1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNAI3Q3KNW1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAI3Q3KNW1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNAI3Q3KNW1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNAI3Q3KNW1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNAI3Q3KNW1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.98■□□□□ 0.79
SNAI3Q3KNW1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SNAI3Q3KNW1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNAI3Q3KNW1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
SNAI3Q3KNW1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNAI3Q3KNW1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNAI3Q3KNW1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.97■□□□□ 0.79
SNAI3Q3KNW1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNAI3Q3KNW1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNAI3Q3KNW1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.97■□□□□ 0.79
SNAI3Q3KNW1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 MIR4508-201ENST00000584178 70 ntBASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 THA1P-201ENST00000590384 1145 ntBASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SNAI3Q3KNW1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 KRT8P33-201ENST00000508125 1423 ntBASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 KRT18P24-201ENST00000344739 1156 ntBASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 AC103834.1-201ENST00000520383 144 ntBASIC19.95■□□□□ 0.78
SNAI3Q3KNW1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms