Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMC4P56277 AC020928.2-201ENST00000588717 2197 ntBASIC17.22■□□□□ 0.35
CMC4P56277 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMC4P56277 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMC4P56277 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CMC4P56277 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CMC4P56277 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.21■□□□□ 0.35
CMC4P56277 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMC4P56277 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMC4P56277 AC092028.1-203ENST00000608262 953 ntBASIC17.21■□□□□ 0.35
CMC4P56277 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMC4P56277 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CMC4P56277 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CMC4P56277 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CMC4P56277 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CMC4P56277 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CMC4P56277 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CMC4P56277 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CMC4P56277 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CMC4P56277 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CMC4P56277 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.2■□□□□ 0.34
CMC4P56277 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CMC4P56277 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CMC4P56277 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CMC4P56277 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CMC4P56277 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.19■□□□□ 0.34
CMC4P56277 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CMC4P56277 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CMC4P56277 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.19■□□□□ 0.34
CMC4P56277 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CMC4P56277 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CMC4P56277 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.18■□□□□ 0.34
CMC4P56277 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.18■□□□□ 0.34
CMC4P56277 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CMC4P56277 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CMC4P56277 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CMC4P56277 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CMC4P56277 AC004448.1-201ENST00000458332 883 ntBASIC17.18■□□□□ 0.34
CMC4P56277 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.18■□□□□ 0.34
CMC4P56277 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.18■□□□□ 0.34
CMC4P56277 MIR6722-201ENST00000617286 78 ntBASIC17.18■□□□□ 0.34
CMC4P56277 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CMC4P56277 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CMC4P56277 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CMC4P56277 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CMC4P56277 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.18■□□□□ 0.34
CMC4P56277 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CMC4P56277 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CMC4P56277 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.17■□□□□ 0.34
CMC4P56277 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CMC4P56277 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.17■□□□□ 0.34
CMC4P56277 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CMC4P56277 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.16■□□□□ 0.34
CMC4P56277 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CMC4P56277 HLA-L-211ENST00000482052 1765 ntBASIC17.16■□□□□ 0.34
CMC4P56277 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.16■□□□□ 0.34
CMC4P56277 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CMC4P56277 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.16■□□□□ 0.34
CMC4P56277 MTDHP2-201ENST00000601468 714 ntBASIC17.16■□□□□ 0.34
CMC4P56277 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CMC4P56277 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.16■□□□□ 0.34
CMC4P56277 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CMC4P56277 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CMC4P56277 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.16■□□□□ 0.34
CMC4P56277 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CMC4P56277 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CMC4P56277 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CMC4P56277 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CMC4P56277 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CMC4P56277 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CMC4P56277 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CMC4P56277 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CMC4P56277 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CMC4P56277 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.15■□□□□ 0.34
CMC4P56277 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CMC4P56277 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.15■□□□□ 0.34
CMC4P56277 AC138932.3-201ENST00000567634 1902 ntBASIC17.15■□□□□ 0.34
CMC4P56277 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CMC4P56277 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.15■□□□□ 0.34
CMC4P56277 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CMC4P56277 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CMC4P56277 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CMC4P56277 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CMC4P56277 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CMC4P56277 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CMC4P56277 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.14■□□□□ 0.33
CMC4P56277 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.14■□□□□ 0.33
CMC4P56277 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.14■□□□□ 0.33
CMC4P56277 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.14■□□□□ 0.33
CMC4P56277 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.14■□□□□ 0.33
CMC4P56277 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CMC4P56277 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CMC4P56277 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CMC4P56277 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CMC4P56277 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.14■□□□□ 0.33
CMC4P56277 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CMC4P56277 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.13■□□□□ 0.33
CMC4P56277 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.13■□□□□ 0.33
CMC4P56277 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMC4P56277 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms