Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 HFI1YPL254W 1467 nt6.79□□□□□ -1.32
MSH4P40965 RRP14YKL082C 1305 nt6.78□□□□□ -1.32
MSH4P40965 TEP1YNL128W 1305 nt6.78□□□□□ -1.32
MSH4P40965 PDR18YNR070W 4002 nt6.78□□□□□ -1.32
MSH4P40965 DHH1YDL160C 1521 nt6.78□□□□□ -1.32
MSH4P40965 CNE1YAL058W 1509 nt6.78□□□□□ -1.32
MSH4P40965 YFT2YDR319C 825 nt6.78□□□□□ -1.32
MSH4P40965 MRPL6YHR147C 645 nt6.78□□□□□ -1.32
MSH4P40965 YLL059CYLL059C 507 nt6.78□□□□□ -1.32
MSH4P40965 CPA1YOR303W 1236 nt6.78□□□□□ -1.32
MSH4P40965 TAH18YPR048W 1872 nt6.78□□□□□ -1.32
MSH4P40965 VRP1YLR337C 2454 nt6.78□□□□□ -1.32
MSH4P40965 YIR007WYIR007W 2295 nt6.78□□□□□ -1.32
MSH4P40965 SKI8YGL213C 1194 nt6.77□□□□□ -1.33
MSH4P40965 AIM23YJL131C 1071 nt6.77□□□□□ -1.33
MSH4P40965 YLR402WYLR402W 192 nt6.77□□□□□ -1.33
MSH4P40965 NPT1YOR209C 1290 nt6.77□□□□□ -1.33
MSH4P40965 ARL3YPL051W 597 nt6.77□□□□□ -1.33
MSH4P40965 GEX1YCL073C 1848 nt6.77□□□□□ -1.33
MSH4P40965 GEX2YKR106W 1848 nt6.77□□□□□ -1.33
MSH4P40965 VPS5YOR069W 2028 nt6.77□□□□□ -1.33
MSH4P40965 FRE7YOL152W 1863 nt6.77□□□□□ -1.33
MSH4P40965 DUG1YFR044C 1446 nt6.76□□□□□ -1.33
MSH4P40965 LAP2YNL045W 2016 nt6.76□□□□□ -1.33
MSH4P40965 PGK1YCR012W 1251 nt6.76□□□□□ -1.33
MSH4P40965 SFT2YBL102W 648 nt6.76□□□□□ -1.33
MSH4P40965 SHE9YDR393W 1371 nt6.76□□□□□ -1.33
MSH4P40965 TRP5YGL026C 2124 nt6.76□□□□□ -1.33
MSH4P40965 FRS2YFL022C 1512 nt6.76□□□□□ -1.33
MSH4P40965 PCL2YDL127W 927 nt6.75□□□□□ -1.33
MSH4P40965 YDR029WYDR029W 315 nt6.75□□□□□ -1.33
MSH4P40965 YGR022CYGR022C 330 nt6.75□□□□□ -1.33
MSH4P40965 MTR2YKL186C 555 nt6.75□□□□□ -1.33
MSH4P40965 MRPL4YLR439W 960 nt6.75□□□□□ -1.33
MSH4P40965 NUP1YOR098C 3231 nt6.75□□□□□ -1.33
MSH4P40965 YFL042CYFL042C 2025 nt6.74□□□□□ -1.33
MSH4P40965 GON7YJL184W 372 nt6.74□□□□□ -1.33
MSH4P40965 MRP17YKL003C 396 nt6.74□□□□□ -1.33
MSH4P40965 PSY3YLR376C 729 nt6.74□□□□□ -1.33
MSH4P40965 YPR123CYPR123C 435 nt6.74□□□□□ -1.33
MSH4P40965 ALT1YLR089C 1779 nt6.74□□□□□ -1.33
MSH4P40965 PRP9YDL030W 1593 nt6.74□□□□□ -1.33
MSH4P40965 YDL026WYDL026W 312 nt6.73□□□□□ -1.33
MSH4P40965 YOL162WYOL162W 648 nt6.73□□□□□ -1.33
MSH4P40965 YSA1YBR111C 696 nt6.73□□□□□ -1.33
MSH4P40965 VPS70YJR126C 2436 nt6.73□□□□□ -1.33
MSH4P40965 MCM3YEL032W 2916 nt6.73□□□□□ -1.33
MSH4P40965 AVO1YOL078W 3531 nt6.72□□□□□ -1.33
MSH4P40965 VHS1YDR247W 1386 nt6.72□□□□□ -1.33
MSH4P40965 ADY2YCR010C 852 nt6.72□□□□□ -1.33
MSH4P40965 YGL218WYGL218W 651 nt6.72□□□□□ -1.33
MSH4P40965 PAN6YIL145C 930 nt6.72□□□□□ -1.33
MSH4P40965 YJL047C-AYJL047C-A 135 nt6.72□□□□□ -1.33
MSH4P40965 CSM3YMR048W 954 nt6.72□□□□□ -1.33
MSH4P40965 YOL166CYOL166C 339 nt6.72□□□□□ -1.33
MSH4P40965 YBR144CYBR144C 315 nt6.72□□□□□ -1.33
MSH4P40965 PDB1YBR221C 1101 nt6.72□□□□□ -1.33
MSH4P40965 RNR3YIL066C 2610 nt6.72□□□□□ -1.33
MSH4P40965 CLP1YOR250C 1338 nt6.72□□□□□ -1.33
MSH4P40965 YHR112CYHR112C 1137 nt6.71□□□□□ -1.34
MSH4P40965 YAL064WYAL064W 285 nt6.71□□□□□ -1.34
MSH4P40965 GIP2YER054C 1647 nt6.7□□□□□ -1.34
MSH4P40965 YCR047W-AYCR047W-A 207 nt6.7□□□□□ -1.34
MSH4P40965 HMRA1YCR097W 381 nt6.7□□□□□ -1.34
MSH4P40965 COX17YLL009C 210 nt6.7□□□□□ -1.34
MSH4P40965 ADD37YMR184W 597 nt6.7□□□□□ -1.34
MSH4P40965 YNL134CYNL134C 1131 nt6.7□□□□□ -1.34
MSH4P40965 RPN8YOR261C 1017 nt6.7□□□□□ -1.34
MSH4P40965 ROG3YFR022W 2202 nt6.7□□□□□ -1.34
MSH4P40965 VPS4YPR173C 1314 nt6.7□□□□□ -1.34
MSH4P40965 LCB2YDR062W 1686 nt6.69□□□□□ -1.34
MSH4P40965 YDL114WYDL114W 927 nt6.69□□□□□ -1.34
MSH4P40965 SCL1YGL011C 759 nt6.69□□□□□ -1.34
MSH4P40965 SUP19tS(UGA)E 82 nt6.69□□□□□ -1.34
MSH4P40965 SUP17tS(UGA)I 82 nt6.69□□□□□ -1.34
MSH4P40965 RRP4YHR069C 1080 nt6.69□□□□□ -1.34
MSH4P40965 SUP16tS(UGA)P 82 nt6.69□□□□□ -1.34
MSH4P40965 YNG2YHR090C 849 nt6.69□□□□□ -1.34
MSH4P40965 DAL3YIR032C 588 nt6.69□□□□□ -1.34
MSH4P40965 SEC65YML105C 822 nt6.69□□□□□ -1.34
MSH4P40965 MAC1YMR021C 1254 nt6.69□□□□□ -1.34
MSH4P40965 SLZ1YNL196C 897 nt6.69□□□□□ -1.34
MSH4P40965 EFM2YBR271W 1260 nt6.69□□□□□ -1.34
MSH4P40965 CST6YIL036W 1764 nt6.69□□□□□ -1.34
MSH4P40965 YDR124WYDR124W 975 nt6.68□□□□□ -1.34
MSH4P40965 IPK1YDR315C 846 nt6.68□□□□□ -1.34
MSH4P40965 ERG26YGL001C 1050 nt6.68□□□□□ -1.34
MSH4P40965 PPE1YHR075C 1203 nt6.68□□□□□ -1.34
MSH4P40965 SPO16YHR153C 597 nt6.68□□□□□ -1.34
MSH4P40965 EFM4YIL064W 774 nt6.68□□□□□ -1.34
MSH4P40965 NOP13YNL175C 1212 nt6.68□□□□□ -1.34
MSH4P40965 ARG1YOL058W 1263 nt6.68□□□□□ -1.34
MSH4P40965 YOL163WYOL163W 510 nt6.68□□□□□ -1.34
MSH4P40965 IFA38YBR159W 1044 nt6.68□□□□□ -1.34
MSH4P40965 YGL036WYGL036W 2730 nt6.68□□□□□ -1.34
MSH4P40965 MNN5YJL186W 1761 nt6.67□□□□□ -1.34
MSH4P40965 DBP9YLR276C 1785 nt6.67□□□□□ -1.34
MSH4P40965 ARP2YDL029W 1176 nt6.67□□□□□ -1.34
MSH4P40965 BUD26YDR241W 288 nt6.67□□□□□ -1.34
MSH4P40965 SNM1YDR478W 597 nt6.67□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms