Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 NUP1YOR098C 3231 nt5.38□□□□□ -1.55
VPS3P23643 MPP10YJR002W 1782 nt5.38□□□□□ -1.55
VPS3P23643 IPK1YDR315C 846 nt5.38□□□□□ -1.55
VPS3P23643 YJR085CYJR085C 318 nt5.38□□□□□ -1.55
VPS3P23643 NPT1YOR209C 1290 nt5.38□□□□□ -1.55
VPS3P23643 MSH1YHR120W 2880 nt5.38□□□□□ -1.55
VPS3P23643 RPT2YDL007W 1314 nt5.38□□□□□ -1.55
VPS3P23643 ATG20YDL113C 1923 nt5.38□□□□□ -1.55
VPS3P23643 AFT1YGL071W 2073 nt5.37□□□□□ -1.55
VPS3P23643 GRX4YER174C 735 nt5.37□□□□□ -1.55
VPS3P23643 MND2YIR025W 1107 nt5.37□□□□□ -1.55
VPS3P23643 WTM2YOR229W 1404 nt5.37□□□□□ -1.55
VPS3P23643 HFI1YPL254W 1467 nt5.37□□□□□ -1.55
VPS3P23643 YIL067CYIL067C 2037 nt5.36□□□□□ -1.55
VPS3P23643 SEC39YLR440C 2130 nt5.36□□□□□ -1.55
VPS3P23643 EXO1YOR033C 2109 nt5.36□□□□□ -1.55
VPS3P23643 SCO1YBR037C 888 nt5.36□□□□□ -1.55
VPS3P23643 ECM33YBR078W 1290 nt5.36□□□□□ -1.55
VPS3P23643 TOM5YPR133W-A 153 nt5.36□□□□□ -1.55
VPS3P23643 NRD1YNL251C 1728 nt5.36□□□□□ -1.55
VPS3P23643 SNF3YDL194W 2655 nt5.36□□□□□ -1.55
VPS3P23643 FHL1YPR104C 2811 nt5.35□□□□□ -1.55
VPS3P23643 TUP1YCR084C 2142 nt5.35□□□□□ -1.55
VPS3P23643 FRE3YOR381W 2136 nt5.35□□□□□ -1.55
VPS3P23643 MNN10YDR245W 1182 nt5.35□□□□□ -1.55
VPS3P23643 MRPL15YLR312W-A 762 nt5.35□□□□□ -1.55
VPS3P23643 RPA49YNL248C 1248 nt5.35□□□□□ -1.55
VPS3P23643 MDY2YOL111C 639 nt5.35□□□□□ -1.55
VPS3P23643 UBA2YDR390C 1911 nt5.35□□□□□ -1.55
VPS3P23643 SSZ1YHR064C 1617 nt5.34□□□□□ -1.55
VPS3P23643 MRF1YGL143C 1242 nt5.34□□□□□ -1.55
VPS3P23643 VPS29YHR012W 849 nt5.34□□□□□ -1.55
VPS3P23643 YKR041WYKR041W 753 nt5.34□□□□□ -1.55
VPS3P23643 GLT1YDL171C 6438 nt5.34□□□□□ -1.56
VPS3P23643 RIM15YFL033C 5313 nt5.33□□□□□ -1.56
VPS3P23643 EEB1YPL095C 1371 nt5.33□□□□□ -1.56
VPS3P23643 YLH47YPR125W 1365 nt5.33□□□□□ -1.56
VPS3P23643 RPT4YOR259C 1314 nt5.33□□□□□ -1.56
VPS3P23643 ELP2YGR200C 2367 nt5.33□□□□□ -1.56
VPS3P23643 YEL053W-AYEL053W-A 348 nt5.33□□□□□ -1.56
VPS3P23643 ARO2YGL148W 1131 nt5.33□□□□□ -1.56
VPS3P23643 ECM15YBL001C 315 nt5.33□□□□□ -1.56
VPS3P23643 YBR016WYBR016W 387 nt5.33□□□□□ -1.56
VPS3P23643 STE50YCL032W 1041 nt5.33□□□□□ -1.56
VPS3P23643 DNF2YDR093W 4839 nt5.33□□□□□ -1.56
VPS3P23643 FOL1YNL256W 2475 nt5.33□□□□□ -1.56
VPS3P23643 PSE1YMR308C 3270 nt5.33□□□□□ -1.56
VPS3P23643 BRF1YGR246C 1791 nt5.32□□□□□ -1.56
VPS3P23643 MLF3YNL074C 1359 nt5.32□□□□□ -1.56
VPS3P23643 YFR034W-AYFR034W-A 288 nt5.32□□□□□ -1.56
VPS3P23643 COG1YGL223C 1254 nt5.32□□□□□ -1.56
VPS3P23643 NAG1YGR031C-A 492 nt5.32□□□□□ -1.56
VPS3P23643 DBP8YHR169W 1296 nt5.32□□□□□ -1.56
VPS3P23643 ATG33YLR356W 594 nt5.32□□□□□ -1.56
VPS3P23643 YMR030W-AYMR030W-A 291 nt5.32□□□□□ -1.56
VPS3P23643 PAP1YKR002W 1707 nt5.31□□□□□ -1.56
VPS3P23643 NOT3YIL038C 2511 nt5.31□□□□□ -1.56
VPS3P23643 PUS6YGR169C 1215 nt5.31□□□□□ -1.56
VPS3P23643 BGL2YGR282C 942 nt5.31□□□□□ -1.56
VPS3P23643 PEX22YAL055W 543 nt5.31□□□□□ -1.56
VPS3P23643 YLR346CYLR346C 306 nt5.31□□□□□ -1.56
VPS3P23643 SPG4YMR107W 348 nt5.31□□□□□ -1.56
VPS3P23643 GCS1YDL226C 1059 nt5.3□□□□□ -1.56
VPS3P23643 ERD1YDR414C 1089 nt5.3□□□□□ -1.56
VPS3P23643 CAB4YGR277C 918 nt5.3□□□□□ -1.56
VPS3P23643 ARB1YER036C 1833 nt5.3□□□□□ -1.56
VPS3P23643 IWR1YDL115C 1062 nt5.29□□□□□ -1.56
VPS3P23643 SEH1YGL100W 1050 nt5.29□□□□□ -1.56
VPS3P23643 YGR035W-AYGR035W-A 222 nt5.29□□□□□ -1.56
VPS3P23643 NQM1YGR043C 1002 nt5.29□□□□□ -1.56
VPS3P23643 RPL21BYPL079W 483 nt5.29□□□□□ -1.56
VPS3P23643 PMT2YAL023C 2280 nt5.28□□□□□ -1.56
VPS3P23643 URA7YBL039C 1740 nt5.28□□□□□ -1.56
VPS3P23643 DRN1YGR093W 1524 nt5.28□□□□□ -1.56
VPS3P23643 APE1YKL103C 1545 nt5.28□□□□□ -1.56
VPS3P23643 PMA1YGL008C 2757 nt5.28□□□□□ -1.56
VPS3P23643 YEF1YEL041W 1488 nt5.28□□□□□ -1.56
VPS3P23643 NOP8YOL144W 1455 nt5.28□□□□□ -1.56
VPS3P23643 MF(ALPHA)2YGL089C 363 nt5.28□□□□□ -1.56
VPS3P23643 YOR024WYOR024W 324 nt5.28□□□□□ -1.56
VPS3P23643 COX11YPL132W 903 nt5.28□□□□□ -1.56
VPS3P23643 JEM1YJL073W 1938 nt5.28□□□□□ -1.56
VPS3P23643 SSY5YJL156C 2100 nt5.27□□□□□ -1.57
VPS3P23643 STE20YHL007C 2820 nt5.27□□□□□ -1.57
VPS3P23643 YDL121CYDL121C 450 nt5.27□□□□□ -1.57
VPS3P23643 PAD1YDR538W 729 nt5.27□□□□□ -1.57
VPS3P23643 MIM2YLR099W-A 264 nt5.27□□□□□ -1.57
VPS3P23643 YTH1YPR107C 627 nt5.27□□□□□ -1.57
VPS3P23643 PXA1YPL147W 2613 nt5.27□□□□□ -1.57
VPS3P23643 APL6YGR261C 2430 nt5.26□□□□□ -1.57
VPS3P23643 CAX4YGR036C 720 nt5.26□□□□□ -1.57
VPS3P23643 NSG1YHR133C 876 nt5.26□□□□□ -1.57
VPS3P23643 NIT2YJL126W 924 nt5.26□□□□□ -1.57
VPS3P23643 GIP1YBR045C 1920 nt5.26□□□□□ -1.57
VPS3P23643 THP1YOL072W 1368 nt5.26□□□□□ -1.57
VPS3P23643 SER33YIL074C 1410 nt5.25□□□□□ -1.57
VPS3P23643 RAT1YOR048C 3021 nt5.25□□□□□ -1.57
VPS3P23643 SKG1YKR100C 1068 nt5.25□□□□□ -1.57
VPS3P23643 GAT3YLR013W 426 nt5.25□□□□□ -1.57
VPS3P23643 YMR105W-AYMR105W-A 195 nt5.25□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 100.6 ms