Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 AC005559.1-201ENST00000589661 871 ntBASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV13-2A0A0B4J235 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-2A0A0B4J235 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV13-2A0A0B4J235 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV13-2A0A0B4J235 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-2A0A0B4J235 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-2A0A0B4J235 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-2A0A0B4J235 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV13-2A0A0B4J235 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-2A0A0B4J235 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV13-2A0A0B4J235 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV13-2A0A0B4J235 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV13-2A0A0B4J235 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TRAV13-2A0A0B4J235 LINC00526-201ENST00000581067 1875 ntBASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 MIR6089-201ENST00000616698 64 ntBASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV13-2A0A0B4J235 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV13-2A0A0B4J235 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms