Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRDM9Q9NQV7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRDM9Q9NQV7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PRDM9Q9NQV7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.95■■□□□ 1.11
PRDM9Q9NQV7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRDM9Q9NQV7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PRDM9Q9NQV7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRDM9Q9NQV7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRDM9Q9NQV7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
PRDM9Q9NQV7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PRDM9Q9NQV7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRDM9Q9NQV7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRDM9Q9NQV7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.94■■□□□ 1.1
PRDM9Q9NQV7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
PRDM9Q9NQV7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRDM9Q9NQV7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRDM9Q9NQV7 LINC00543-201ENST00000567234 1845 ntBASIC21.94■■□□□ 1.1
PRDM9Q9NQV7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 BX664725.1-201ENST00000438252 379 ntBASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 Z92544.1-202ENST00000571933 1220 ntBASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 AL161729.1-201ENST00000604104 1402 ntBASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 AC137630.3-201ENST00000607245 391 ntBASIC21.93■■□□□ 1.1
PRDM9Q9NQV7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRDM9Q9NQV7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRDM9Q9NQV7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRDM9Q9NQV7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.91■■□□□ 1.1
PRDM9Q9NQV7 HLA-L-211ENST00000482052 1765 ntBASIC21.91■■□□□ 1.1
PRDM9Q9NQV7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
PRDM9Q9NQV7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRDM9Q9NQV7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRDM9Q9NQV7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.9■■□□□ 1.1
PRDM9Q9NQV7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.89■■□□□ 1.1
PRDM9Q9NQV7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
PRDM9Q9NQV7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PRDM9Q9NQV7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRDM9Q9NQV7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.89■■□□□ 1.09
PRDM9Q9NQV7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
PRDM9Q9NQV7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PRDM9Q9NQV7 AC239859.2-201ENST00000444165 318 ntBASIC21.88■■□□□ 1.09
PRDM9Q9NQV7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.88■■□□□ 1.09
PRDM9Q9NQV7 KRT125P-201ENST00000546827 989 ntBASIC21.88■■□□□ 1.09
PRDM9Q9NQV7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRDM9Q9NQV7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.87■■□□□ 1.09
PRDM9Q9NQV7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRDM9Q9NQV7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PRDM9Q9NQV7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms