Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
NDST4Q9H3R1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.33■■□□□ 1.65
NDST4Q9H3R1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NDST4Q9H3R1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
NDST4Q9H3R1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.32■■□□□ 1.64
NDST4Q9H3R1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.32■■□□□ 1.64
NDST4Q9H3R1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NDST4Q9H3R1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NDST4Q9H3R1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.31■■□□□ 1.64
NDST4Q9H3R1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.31■■□□□ 1.64
NDST4Q9H3R1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.31■■□□□ 1.64
NDST4Q9H3R1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
NDST4Q9H3R1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NDST4Q9H3R1 AC090877.2-201ENST00000558441 1738 ntBASIC25.31■■□□□ 1.64
NDST4Q9H3R1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NDST4Q9H3R1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
NDST4Q9H3R1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
NDST4Q9H3R1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
NDST4Q9H3R1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
NDST4Q9H3R1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NDST4Q9H3R1 AC129492.7-201ENST00000622992 756 ntBASIC25.3■■□□□ 1.64
NDST4Q9H3R1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.3■■□□□ 1.64
NDST4Q9H3R1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NDST4Q9H3R1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NDST4Q9H3R1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.29■■□□□ 1.64
NDST4Q9H3R1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NDST4Q9H3R1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NDST4Q9H3R1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NDST4Q9H3R1 AL592295.1-201ENST00000400984 884 ntBASIC25.29■■□□□ 1.64
NDST4Q9H3R1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NDST4Q9H3R1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NDST4Q9H3R1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.28■■□□□ 1.64
NDST4Q9H3R1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NDST4Q9H3R1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NDST4Q9H3R1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NDST4Q9H3R1 KRT18P60-201ENST00000312876 1297 ntBASIC25.27■■□□□ 1.64
NDST4Q9H3R1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
NDST4Q9H3R1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NDST4Q9H3R1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.27■■□□□ 1.64
NDST4Q9H3R1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.26■■□□□ 1.63
NDST4Q9H3R1 LONRF2P2-201ENST00000439212 571 ntBASIC25.26■■□□□ 1.63
NDST4Q9H3R1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NDST4Q9H3R1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NDST4Q9H3R1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
NDST4Q9H3R1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NDST4Q9H3R1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NDST4Q9H3R1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.25■■□□□ 1.63
NDST4Q9H3R1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NDST4Q9H3R1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.25■■□□□ 1.63
NDST4Q9H3R1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.25■■□□□ 1.63
NDST4Q9H3R1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NDST4Q9H3R1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
NDST4Q9H3R1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
NDST4Q9H3R1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.24■■□□□ 1.63
NDST4Q9H3R1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.24■■□□□ 1.63
NDST4Q9H3R1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
NDST4Q9H3R1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
NDST4Q9H3R1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDST4Q9H3R1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDST4Q9H3R1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDST4Q9H3R1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDST4Q9H3R1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDST4Q9H3R1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDST4Q9H3R1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.22■■□□□ 1.63
NDST4Q9H3R1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDST4Q9H3R1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.22■■□□□ 1.63
NDST4Q9H3R1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
NDST4Q9H3R1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.21■■□□□ 1.63
NDST4Q9H3R1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NDST4Q9H3R1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NDST4Q9H3R1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
NDST4Q9H3R1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NDST4Q9H3R1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NDST4Q9H3R1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NDST4Q9H3R1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NDST4Q9H3R1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NDST4Q9H3R1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NDST4Q9H3R1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
NDST4Q9H3R1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NDST4Q9H3R1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NDST4Q9H3R1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
NDST4Q9H3R1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NDST4Q9H3R1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NDST4Q9H3R1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
NDST4Q9H3R1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.2■■□□□ 1.62
NDST4Q9H3R1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
NDST4Q9H3R1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
NDST4Q9H3R1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NDST4Q9H3R1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
NDST4Q9H3R1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms