Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC01006Q8NI28 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01006Q8NI28 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LINC01006Q8NI28 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.24■□□□□ 0.51
LINC01006Q8NI28 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01006Q8NI28 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.24■□□□□ 0.51
LINC01006Q8NI28 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LINC01006Q8NI28 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01006Q8NI28 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01006Q8NI28 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC01006Q8NI28 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01006Q8NI28 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01006Q8NI28 AC135279.3-201ENST00000610945 1311 ntBASIC18.23■□□□□ 0.51
LINC01006Q8NI28 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 ZNRF2P3-201ENST00000424200 374 ntBASIC18.22■□□□□ 0.51
LINC01006Q8NI28 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LINC01006Q8NI28 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01006Q8NI28 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC01006Q8NI28 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01006Q8NI28 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LINC01006Q8NI28 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01006Q8NI28 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LINC01006Q8NI28 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01006Q8NI28 SUDS3P1-201ENST00000505831 966 ntBASIC18.21■□□□□ 0.51
LINC01006Q8NI28 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.21■□□□□ 0.51
LINC01006Q8NI28 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC01006Q8NI28 AC005703.6-201ENST00000623265 1329 ntBASIC18.21■□□□□ 0.51
LINC01006Q8NI28 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
LINC01006Q8NI28 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 AC024257.2-201ENST00000549699 147 ntBASIC18.2■□□□□ 0.5
LINC01006Q8NI28 AL031432.3-201ENST00000607698 485 ntBASIC18.2■□□□□ 0.5
LINC01006Q8NI28 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LINC01006Q8NI28 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 EDA-201ENST00000338901 1233 ntBASIC18.19■□□□□ 0.5
LINC01006Q8NI28 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LINC01006Q8NI28 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01006Q8NI28 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LINC01006Q8NI28 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LINC01006Q8NI28 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LINC01006Q8NI28 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LINC01006Q8NI28 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LINC01006Q8NI28 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LINC01006Q8NI28 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01006Q8NI28 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01006Q8NI28 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01006Q8NI28 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.17■□□□□ 0.5
LINC01006Q8NI28 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01006Q8NI28 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LINC01006Q8NI28 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC01006Q8NI28 AL355001.2-201ENST00000620617 1191 ntBASIC18.17■□□□□ 0.5
LINC01006Q8NI28 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01006Q8NI28 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LINC01006Q8NI28 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01006Q8NI28 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
LINC01006Q8NI28 AC092803.2-201ENST00000564287 1899 ntBASIC18.16■□□□□ 0.5
LINC01006Q8NI28 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01006Q8NI28 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01006Q8NI28 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01006Q8NI28 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC01006Q8NI28 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
LINC01006Q8NI28 RARRES2P6-201ENST00000567333 442 ntBASIC18.16■□□□□ 0.5
LINC01006Q8NI28 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.15■□□□□ 0.5
LINC01006Q8NI28 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms