Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM59Q8IWR1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 AC019171.1-201ENST00000601251 1056 ntBASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.3■■□□□ 1.64
TRIM59Q8IWR1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.29■■□□□ 1.64
TRIM59Q8IWR1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRIM59Q8IWR1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TRIM59Q8IWR1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
TRIM59Q8IWR1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
TRIM59Q8IWR1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
TRIM59Q8IWR1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 ABCB10P4-201ENST00000566803 2184 ntBASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 AC004987.1-201ENST00000428627 508 ntBASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
TRIM59Q8IWR1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM59Q8IWR1 ATP5G2P3-201ENST00000429083 425 ntBASIC25.27■■□□□ 1.64
TRIM59Q8IWR1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.27■■□□□ 1.64
TRIM59Q8IWR1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM59Q8IWR1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM59Q8IWR1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM59Q8IWR1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRIM59Q8IWR1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.27■■□□□ 1.64
TRIM59Q8IWR1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.27■■□□□ 1.64
TRIM59Q8IWR1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRIM59Q8IWR1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRIM59Q8IWR1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM59Q8IWR1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM59Q8IWR1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM59Q8IWR1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM59Q8IWR1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM59Q8IWR1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM59Q8IWR1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.24■■□□□ 1.63
TRIM59Q8IWR1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRIM59Q8IWR1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM59Q8IWR1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM59Q8IWR1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM59Q8IWR1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRIM59Q8IWR1 AC139795.1-202ENST00000500444 432 ntBASIC25.23■■□□□ 1.63
TRIM59Q8IWR1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.23■■□□□ 1.63
TRIM59Q8IWR1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
TRIM59Q8IWR1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM59Q8IWR1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM59Q8IWR1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.21■■□□□ 1.63
TRIM59Q8IWR1 AC011551.1-201ENST00000614101 683 ntBASIC25.21■■□□□ 1.63
TRIM59Q8IWR1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM59Q8IWR1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TRIM59Q8IWR1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
TRIM59Q8IWR1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
TRIM59Q8IWR1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRIM59Q8IWR1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.2■■□□□ 1.62
TRIM59Q8IWR1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRIM59Q8IWR1 AC022616.5-201ENST00000518796 181 ntBASIC25.2■■□□□ 1.62
TRIM59Q8IWR1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms