Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LRRTM1Q86UE6 AC016575.1-201ENST00000607026 382 ntBASIC20.14■□□□□ 0.81
LRRTM1Q86UE6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRTM1Q86UE6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRTM1Q86UE6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRTM1Q86UE6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 AC092296.2-201ENST00000589470 999 ntBASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRTM1Q86UE6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 FOXO3B-201ENST00000395675 1928 ntBASIC20.12■□□□□ 0.81
LRRTM1Q86UE6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRTM1Q86UE6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRTM1Q86UE6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.11■□□□□ 0.81
LRRTM1Q86UE6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRTM1Q86UE6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRRTM1Q86UE6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LRRTM1Q86UE6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.11■□□□□ 0.81
LRRTM1Q86UE6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRTM1Q86UE6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRTM1Q86UE6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRTM1Q86UE6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRTM1Q86UE6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRRTM1Q86UE6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRTM1Q86UE6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRTM1Q86UE6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRRTM1Q86UE6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.1■□□□□ 0.81
LRRTM1Q86UE6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.09■□□□□ 0.81
LRRTM1Q86UE6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRTM1Q86UE6 RP9P-202ENST00000450133 1212 ntBASIC20.09■□□□□ 0.81
LRRTM1Q86UE6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LRRTM1Q86UE6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRTM1Q86UE6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.09■□□□□ 0.81
LRRTM1Q86UE6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRRTM1Q86UE6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRTM1Q86UE6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRTM1Q86UE6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRRTM1Q86UE6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LRRTM1Q86UE6 ABHD17AP4-201ENST00000411545 909 ntBASIC20.08■□□□□ 0.81
LRRTM1Q86UE6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRRTM1Q86UE6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.08■□□□□ 0.8
LRRTM1Q86UE6 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRTM1Q86UE6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRTM1Q86UE6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRTM1Q86UE6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRTM1Q86UE6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRTM1Q86UE6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRTM1Q86UE6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LRRTM1Q86UE6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRTM1Q86UE6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 AC093536.1-201ENST00000569153 554 ntBASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM1Q86UE6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 ECEL1P2-201ENST00000461596 1295 ntBASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM1Q86UE6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms