Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SWSAP1Q6NVH7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SWSAP1Q6NVH7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SWSAP1Q6NVH7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.01■■□□□ 1.75
SWSAP1Q6NVH7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SWSAP1Q6NVH7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SWSAP1Q6NVH7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26■■□□□ 1.75
SWSAP1Q6NVH7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26■■□□□ 1.75
SWSAP1Q6NVH7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SWSAP1Q6NVH7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26■■□□□ 1.75
SWSAP1Q6NVH7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26■■□□□ 1.75
SWSAP1Q6NVH7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SWSAP1Q6NVH7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26■■□□□ 1.75
SWSAP1Q6NVH7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SWSAP1Q6NVH7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
SWSAP1Q6NVH7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.99■■□□□ 1.75
SWSAP1Q6NVH7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SWSAP1Q6NVH7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SWSAP1Q6NVH7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.99■■□□□ 1.75
SWSAP1Q6NVH7 SNX5-217ENST00000606557 1087 ntBASIC25.99■■□□□ 1.75
SWSAP1Q6NVH7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.99■■□□□ 1.75
SWSAP1Q6NVH7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SWSAP1Q6NVH7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SWSAP1Q6NVH7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
SWSAP1Q6NVH7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SWSAP1Q6NVH7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.98■■□□□ 1.75
SWSAP1Q6NVH7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SWSAP1Q6NVH7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SWSAP1Q6NVH7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SWSAP1Q6NVH7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SWSAP1Q6NVH7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SWSAP1Q6NVH7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.97■■□□□ 1.75
SWSAP1Q6NVH7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.97■■□□□ 1.75
SWSAP1Q6NVH7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
SWSAP1Q6NVH7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 MIR6724-1-201ENST00000616420 92 ntBASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 MIR6724-2-201ENST00000616483 92 ntBASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 MIR6724-4-201ENST00000617390 92 ntBASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 MIR6724-3-201ENST00000622482 92 ntBASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
SWSAP1Q6NVH7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SWSAP1Q6NVH7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SWSAP1Q6NVH7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.95■■□□□ 1.74
SWSAP1Q6NVH7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SWSAP1Q6NVH7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.95■■□□□ 1.74
SWSAP1Q6NVH7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SWSAP1Q6NVH7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SWSAP1Q6NVH7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.94■■□□□ 1.74
SWSAP1Q6NVH7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.94■■□□□ 1.74
SWSAP1Q6NVH7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.94■■□□□ 1.74
SWSAP1Q6NVH7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.94■■□□□ 1.74
SWSAP1Q6NVH7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
SWSAP1Q6NVH7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SWSAP1Q6NVH7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SWSAP1Q6NVH7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SWSAP1Q6NVH7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
SWSAP1Q6NVH7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SWSAP1Q6NVH7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.93■■□□□ 1.74
SWSAP1Q6NVH7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
SWSAP1Q6NVH7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
SWSAP1Q6NVH7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SWSAP1Q6NVH7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SWSAP1Q6NVH7 AC022211.4-201ENST00000625094 2161 ntBASIC25.92■■□□□ 1.74
SWSAP1Q6NVH7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SWSAP1Q6NVH7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 AL117332.1-201ENST00000622628 974 ntBASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SWSAP1Q6NVH7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 AC004448.1-201ENST00000458332 883 ntBASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 MIR6722-201ENST00000617286 78 ntBASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 AC008406.3-201ENST00000620001 1374 ntBASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SWSAP1Q6NVH7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.89■■□□□ 1.74
SWSAP1Q6NVH7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
SWSAP1Q6NVH7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SWSAP1Q6NVH7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SWSAP1Q6NVH7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SWSAP1Q6NVH7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SWSAP1Q6NVH7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms