Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SNX30Q5VWJ9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
SNX30Q5VWJ9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNX30Q5VWJ9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNX30Q5VWJ9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.42■■□□□ 1.5
SNX30Q5VWJ9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
SNX30Q5VWJ9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.42■■□□□ 1.5
SNX30Q5VWJ9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.42■■□□□ 1.5
SNX30Q5VWJ9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNX30Q5VWJ9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNX30Q5VWJ9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNX30Q5VWJ9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNX30Q5VWJ9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.41■■□□□ 1.5
SNX30Q5VWJ9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.41■■□□□ 1.5
SNX30Q5VWJ9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.41■■□□□ 1.5
SNX30Q5VWJ9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNX30Q5VWJ9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SNX30Q5VWJ9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNX30Q5VWJ9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNX30Q5VWJ9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.4■■□□□ 1.5
SNX30Q5VWJ9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SNX30Q5VWJ9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNX30Q5VWJ9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.39■■□□□ 1.5
SNX30Q5VWJ9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.39■■□□□ 1.5
SNX30Q5VWJ9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
SNX30Q5VWJ9 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.39■■□□□ 1.49
SNX30Q5VWJ9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SNX30Q5VWJ9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.49
SNX30Q5VWJ9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNX30Q5VWJ9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.38■■□□□ 1.49
SNX30Q5VWJ9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNX30Q5VWJ9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.38■■□□□ 1.49
SNX30Q5VWJ9 AC131212.1-201ENST00000613771 668 ntBASIC24.38■■□□□ 1.49
SNX30Q5VWJ9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNX30Q5VWJ9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNX30Q5VWJ9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNX30Q5VWJ9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SNX30Q5VWJ9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 KRT16P3-201ENST00000439127 1283 ntBASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SNX30Q5VWJ9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 TSPY9P-201ENST00000440215 945 ntBASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 TSPY11P-201ENST00000442607 1045 ntBASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 MIR6089-201ENST00000616698 64 ntBASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SNX30Q5VWJ9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.35■■□□□ 1.49
SNX30Q5VWJ9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SNX30Q5VWJ9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.35■■□□□ 1.49
SNX30Q5VWJ9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.35■■□□□ 1.49
SNX30Q5VWJ9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.35■■□□□ 1.49
SNX30Q5VWJ9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNX30Q5VWJ9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.35■■□□□ 1.49
SNX30Q5VWJ9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNX30Q5VWJ9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.34■■□□□ 1.49
SNX30Q5VWJ9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SNX30Q5VWJ9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNX30Q5VWJ9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNX30Q5VWJ9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNX30Q5VWJ9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.33■■□□□ 1.49
SNX30Q5VWJ9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNX30Q5VWJ9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNX30Q5VWJ9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.32■■□□□ 1.48
SNX30Q5VWJ9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.32■■□□□ 1.48
SNX30Q5VWJ9 AC010997.5-201ENST00000609182 354 ntBASIC24.32■■□□□ 1.48
SNX30Q5VWJ9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
SNX30Q5VWJ9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SNX30Q5VWJ9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms