Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 GUSBP6-202ENST00000438529 1198 ntBASIC13.1□□□□□ -0.31
UBR4Q5T4S7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.1□□□□□ -0.31
UBR4Q5T4S7 TPRG1LP1-201ENST00000598702 760 ntBASIC13.1□□□□□ -0.31
UBR4Q5T4S7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.09□□□□□ -0.31
UBR4Q5T4S7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC13.09□□□□□ -0.31
UBR4Q5T4S7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.31
UBR4Q5T4S7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 ECEL1P3-201ENST00000427961 737 ntBASIC13.08□□□□□ -0.32
UBR4Q5T4S7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 AC142086.2-201ENST00000569753 217 ntBASIC13.08□□□□□ -0.32
UBR4Q5T4S7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 RPS2P52-201ENST00000469610 820 ntBASIC13.08□□□□□ -0.32
UBR4Q5T4S7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.08□□□□□ -0.32
UBR4Q5T4S7 AL358852.1-201ENST00000623174 1268 ntBASIC13.08□□□□□ -0.32
UBR4Q5T4S7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 KRT18P14-201ENST00000534205 1250 ntBASIC13.07□□□□□ -0.32
UBR4Q5T4S7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 AC087239.1-201ENST00000622671 572 ntBASIC13.07□□□□□ -0.32
UBR4Q5T4S7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.07□□□□□ -0.32
UBR4Q5T4S7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 AL138781.1-201ENST00000566567 1274 ntBASIC13.07□□□□□ -0.32
UBR4Q5T4S7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.07□□□□□ -0.32
UBR4Q5T4S7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.06□□□□□ -0.32
UBR4Q5T4S7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 AC098590.1-201ENST00000468126 897 ntBASIC13.06□□□□□ -0.32
UBR4Q5T4S7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 AC092118.2-201ENST00000613495 667 ntBASIC13.06□□□□□ -0.32
UBR4Q5T4S7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 TSPY26P-201ENST00000476365 1326 ntBASIC13.06□□□□□ -0.32
UBR4Q5T4S7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBR4Q5T4S7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 PRORSD1P-201ENST00000295112 541 ntBASIC13.05□□□□□ -0.32
UBR4Q5T4S7 AC012414.1-201ENST00000556676 535 ntBASIC13.05□□□□□ -0.32
UBR4Q5T4S7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.05□□□□□ -0.32
UBR4Q5T4S7 AP004607.4-201ENST00000530158 1459 ntBASIC13.04□□□□□ -0.32
UBR4Q5T4S7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBR4Q5T4S7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms