Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM48Q5RL73 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM48Q5RL73 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM48Q5RL73 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM48Q5RL73 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM48Q5RL73 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBM48Q5RL73 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RBM48Q5RL73 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RBM48Q5RL73 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RBM48Q5RL73 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.18■□□□□ 0.98
RBM48Q5RL73 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RBM48Q5RL73 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.18■□□□□ 0.98
RBM48Q5RL73 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBM48Q5RL73 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM48Q5RL73 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBM48Q5RL73 AL024507.2-201ENST00000606070 2574 ntBASIC21.17■□□□□ 0.98
RBM48Q5RL73 AL359258.2-201ENST00000564063 1566 ntBASIC21.17■□□□□ 0.98
RBM48Q5RL73 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM48Q5RL73 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM48Q5RL73 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBM48Q5RL73 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RBM48Q5RL73 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBM48Q5RL73 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RBM48Q5RL73 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RBM48Q5RL73 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM48Q5RL73 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.16■□□□□ 0.98
RBM48Q5RL73 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM48Q5RL73 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RBM48Q5RL73 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RBM48Q5RL73 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM48Q5RL73 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM48Q5RL73 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.16■□□□□ 0.98
RBM48Q5RL73 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.16■□□□□ 0.98
RBM48Q5RL73 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RBM48Q5RL73 GUSBP5-202ENST00000510805 1989 ntBASIC21.16■□□□□ 0.98
RBM48Q5RL73 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM48Q5RL73 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.15■□□□□ 0.98
RBM48Q5RL73 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM48Q5RL73 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RBM48Q5RL73 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RBM48Q5RL73 ECEL1P1-201ENST00000373592 1742 ntBASIC21.15■□□□□ 0.98
RBM48Q5RL73 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RBM48Q5RL73 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RBM48Q5RL73 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RBM48Q5RL73 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RBM48Q5RL73 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RBM48Q5RL73 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RBM48Q5RL73 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM48Q5RL73 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM48Q5RL73 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.13■□□□□ 0.97
RBM48Q5RL73 C1orf229-201ENST00000623686 2258 ntBASIC21.13■□□□□ 0.97
RBM48Q5RL73 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM48Q5RL73 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM48Q5RL73 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RBM48Q5RL73 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RBM48Q5RL73 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RBM48Q5RL73 MIR219A2-201ENST00000608502 1504 ntBASIC21.13■□□□□ 0.97
RBM48Q5RL73 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.13■□□□□ 0.97
RBM48Q5RL73 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM48Q5RL73 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM48Q5RL73 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM48Q5RL73 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM48Q5RL73 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RBM48Q5RL73 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RBM48Q5RL73 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RBM48Q5RL73 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM48Q5RL73 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RBM48Q5RL73 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RBM48Q5RL73 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RBM48Q5RL73 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.12■□□□□ 0.97
RBM48Q5RL73 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM48Q5RL73 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM48Q5RL73 DUSP8P3-201ENST00000399571 1760 ntBASIC21.11■□□□□ 0.97
RBM48Q5RL73 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM48Q5RL73 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.11■□□□□ 0.97
RBM48Q5RL73 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.11■□□□□ 0.97
RBM48Q5RL73 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBM48Q5RL73 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RBM48Q5RL73 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.11■□□□□ 0.97
RBM48Q5RL73 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RBM48Q5RL73 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RBM48Q5RL73 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RBM48Q5RL73 ANOS2P-203ENST00000472227 1816 ntBASIC21.11■□□□□ 0.97
RBM48Q5RL73 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.1■□□□□ 0.97
RBM48Q5RL73 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM48Q5RL73 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM48Q5RL73 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM48Q5RL73 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RBM48Q5RL73 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.1■□□□□ 0.97
RBM48Q5RL73 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM48Q5RL73 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RBM48Q5RL73 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RBM48Q5RL73 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.1■□□□□ 0.97
RBM48Q5RL73 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RBM48Q5RL73 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.1■□□□□ 0.97
RBM48Q5RL73 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RBM48Q5RL73 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RBM48Q5RL73 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RBM48Q5RL73 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RBM48Q5RL73 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms