Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP3S2P59780 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
AP3S2P59780 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3S2P59780 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.88■□□□□ 0.77
AP3S2P59780 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.88■□□□□ 0.77
AP3S2P59780 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AP3S2P59780 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
AP3S2P59780 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.88■□□□□ 0.77
AP3S2P59780 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AP3S2P59780 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S2P59780 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
AP3S2P59780 EP400NL-214ENST00000641289 2402 ntBASIC19.87■□□□□ 0.77
AP3S2P59780 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S2P59780 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S2P59780 DUX4L28-201ENST00000623687 678 ntBASIC19.87■□□□□ 0.77
AP3S2P59780 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S2P59780 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S2P59780 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S2P59780 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S2P59780 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S2P59780 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
AP3S2P59780 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
AP3S2P59780 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
AP3S2P59780 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
AP3S2P59780 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.86■□□□□ 0.77
AP3S2P59780 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.86■□□□□ 0.77
AP3S2P59780 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.86■□□□□ 0.77
AP3S2P59780 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AP3S2P59780 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP3S2P59780 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3S2P59780 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.85■□□□□ 0.77
AP3S2P59780 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3S2P59780 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
AP3S2P59780 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3S2P59780 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.85■□□□□ 0.77
AP3S2P59780 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP3S2P59780 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
AP3S2P59780 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
AP3S2P59780 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
AP3S2P59780 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP3S2P59780 AL359258.2-201ENST00000564063 1566 ntBASIC19.84■□□□□ 0.77
AP3S2P59780 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP3S2P59780 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
AP3S2P59780 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
AP3S2P59780 AC127496.7-201ENST00000625110 1798 ntBASIC19.84■□□□□ 0.77
AP3S2P59780 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.84■□□□□ 0.77
AP3S2P59780 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
AP3S2P59780 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP3S2P59780 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.84■□□□□ 0.77
AP3S2P59780 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3S2P59780 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
AP3S2P59780 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3S2P59780 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3S2P59780 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP3S2P59780 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AP3S2P59780 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S2P59780 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S2P59780 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S2P59780 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S2P59780 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP3S2P59780 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S2P59780 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S2P59780 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.82■□□□□ 0.76
AP3S2P59780 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S2P59780 MIR3665-201ENST00000578708 105 ntBASIC19.82■□□□□ 0.76
AP3S2P59780 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S2P59780 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S2P59780 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
AP3S2P59780 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S2P59780 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
AP3S2P59780 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
AP3S2P59780 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3S2P59780 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.82■□□□□ 0.76
AP3S2P59780 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
AP3S2P59780 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S2P59780 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
AP3S2P59780 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S2P59780 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S2P59780 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S2P59780 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S2P59780 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S2P59780 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S2P59780 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3S2P59780 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.81■□□□□ 0.76
AP3S2P59780 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S2P59780 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S2P59780 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S2P59780 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.8■□□□□ 0.76
AP3S2P59780 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3S2P59780 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
AP3S2P59780 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms