Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.39■■□□□ 1.82
USP11P51784 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.39■■□□□ 1.82
USP11P51784 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
USP11P51784 KRT125P-201ENST00000546827 989 ntBASIC26.39■■□□□ 1.82
USP11P51784 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
USP11P51784 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
USP11P51784 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
USP11P51784 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
USP11P51784 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
USP11P51784 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
USP11P51784 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.38■■□□□ 1.81
USP11P51784 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP11P51784 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP11P51784 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.37■■□□□ 1.81
USP11P51784 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.37■■□□□ 1.81
USP11P51784 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP11P51784 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP11P51784 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USP11P51784 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.37■■□□□ 1.81
USP11P51784 HLA-L-211ENST00000482052 1765 ntBASIC26.37■■□□□ 1.81
USP11P51784 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USP11P51784 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP11P51784 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USP11P51784 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
USP11P51784 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.36■■□□□ 1.81
USP11P51784 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
USP11P51784 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP11P51784 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.36■■□□□ 1.81
USP11P51784 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.36■■□□□ 1.81
USP11P51784 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.36■■□□□ 1.81
USP11P51784 MIR4787-201ENST00000607364 84 ntBASIC26.36■■□□□ 1.81
USP11P51784 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.36■■□□□ 1.81
USP11P51784 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.35■■□□□ 1.81
USP11P51784 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.35■■□□□ 1.81
USP11P51784 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.35■■□□□ 1.81
USP11P51784 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP11P51784 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP11P51784 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP11P51784 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP11P51784 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP11P51784 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP11P51784 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP11P51784 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP11P51784 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP11P51784 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.33■■□□□ 1.81
USP11P51784 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.33■■□□□ 1.81
USP11P51784 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP11P51784 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP11P51784 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
USP11P51784 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP11P51784 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
USP11P51784 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP11P51784 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.32■■□□□ 1.8
USP11P51784 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP11P51784 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
USP11P51784 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.32■■□□□ 1.8
USP11P51784 GUSBP5-201ENST00000418136 578 ntBASIC26.32■■□□□ 1.8
USP11P51784 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.32■■□□□ 1.8
USP11P51784 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
USP11P51784 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.32■■□□□ 1.8
USP11P51784 AC092028.1-203ENST00000608262 953 ntBASIC26.32■■□□□ 1.8
USP11P51784 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.32■■□□□ 1.8
USP11P51784 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP11P51784 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP11P51784 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP11P51784 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP11P51784 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP11P51784 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.31■■□□□ 1.8
USP11P51784 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.31■■□□□ 1.8
USP11P51784 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
USP11P51784 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP11P51784 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP11P51784 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP11P51784 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP11P51784 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP11P51784 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP11P51784 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP11P51784 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP11P51784 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP11P51784 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
USP11P51784 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP11P51784 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.28■■□□□ 1.8
USP11P51784 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.28■■□□□ 1.8
USP11P51784 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
USP11P51784 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP11P51784 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP11P51784 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
USP11P51784 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
USP11P51784 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP11P51784 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP11P51784 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.27■■□□□ 1.8
USP11P51784 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.27■■□□□ 1.8
USP11P51784 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.27■■□□□ 1.8
USP11P51784 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP11P51784 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.26■■□□□ 1.79
USP11P51784 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.26■■□□□ 1.79
USP11P51784 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP11P51784 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.26■■□□□ 1.79
USP11P51784 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.25■■□□□ 1.79
USP11P51784 AC131274.2-201ENST00000580697 1507 ntBASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms