Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CCNFP41002 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.34■■□□□ 1.33
CCNFP41002 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCNFP41002 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
CCNFP41002 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.33■■□□□ 1.33
CCNFP41002 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCNFP41002 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCNFP41002 AC129492.7-201ENST00000622992 756 ntBASIC23.33■■□□□ 1.33
CCNFP41002 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCNFP41002 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CCNFP41002 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
CCNFP41002 ABCB10P4-201ENST00000566803 2184 ntBASIC23.33■■□□□ 1.32
CCNFP41002 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CCNFP41002 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CCNFP41002 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNFP41002 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNFP41002 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
CCNFP41002 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CCNFP41002 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CCNFP41002 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CCNFP41002 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNFP41002 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.31■■□□□ 1.32
CCNFP41002 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.31■■□□□ 1.32
CCNFP41002 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNFP41002 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNFP41002 DUX4L9-201ENST00000449051 1259 ntBASIC23.31■■□□□ 1.32
CCNFP41002 MIR6765-201ENST00000614092 87 ntBASIC23.31■■□□□ 1.32
CCNFP41002 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CCNFP41002 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNFP41002 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CCNFP41002 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.31■■□□□ 1.32
CCNFP41002 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.3■■□□□ 1.32
CCNFP41002 HLA-L-211ENST00000482052 1765 ntBASIC23.3■■□□□ 1.32
CCNFP41002 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNFP41002 SPCS2P3-201ENST00000500401 656 ntBASIC23.3■■□□□ 1.32
CCNFP41002 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.3■■□□□ 1.32
CCNFP41002 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNFP41002 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CCNFP41002 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.3■■□□□ 1.32
CCNFP41002 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNFP41002 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNFP41002 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNFP41002 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNFP41002 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CCNFP41002 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CCNFP41002 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNFP41002 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNFP41002 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNFP41002 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CCNFP41002 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNFP41002 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CCNFP41002 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNFP41002 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNFP41002 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CCNFP41002 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNFP41002 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNFP41002 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNFP41002 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNFP41002 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNFP41002 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNFP41002 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNFP41002 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNFP41002 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CCNFP41002 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNFP41002 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.26■■□□□ 1.31
CCNFP41002 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNFP41002 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNFP41002 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CCNFP41002 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCNFP41002 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNFP41002 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNFP41002 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.26■■□□□ 1.31
CCNFP41002 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNFP41002 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNFP41002 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNFP41002 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CCNFP41002 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.25■■□□□ 1.31
CCNFP41002 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNFP41002 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCNFP41002 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCNFP41002 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCNFP41002 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.25■■□□□ 1.31
CCNFP41002 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCNFP41002 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.24■■□□□ 1.31
CCNFP41002 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.24■■□□□ 1.31
CCNFP41002 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCNFP41002 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCNFP41002 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCNFP41002 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CCNFP41002 AC012354.3-201ENST00000623734 483 ntBASIC23.23■■□□□ 1.31
CCNFP41002 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCNFP41002 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
CCNFP41002 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCNFP41002 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.22■■□□□ 1.31
CCNFP41002 RPS2P7-201ENST00000447334 885 ntBASIC23.22■■□□□ 1.31
CCNFP41002 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.22■■□□□ 1.31
CCNFP41002 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCNFP41002 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCNFP41002 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.21■■□□□ 1.31
CCNFP41002 ATP5G2P3-201ENST00000429083 425 ntBASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms