Protein–RNA interactions for Protein: P04001

OPN1MW, Medium-wave-sensitive opsin 1, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1MWP04001 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
OPN1MWP04001 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.03■□□□□ 0.64
OPN1MWP04001 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.03■□□□□ 0.64
OPN1MWP04001 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
OPN1MWP04001 YBX1P4-201ENST00000392794 808 ntBASIC19.03■□□□□ 0.64
OPN1MWP04001 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.03■□□□□ 0.64
OPN1MWP04001 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.03■□□□□ 0.64
OPN1MWP04001 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
OPN1MWP04001 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
OPN1MWP04001 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
OPN1MWP04001 SLC6A10P-202ENST00000431994 2058 ntBASIC19.02■□□□□ 0.64
OPN1MWP04001 KRT8P33-201ENST00000508125 1423 ntBASIC19.02■□□□□ 0.64
OPN1MWP04001 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
OPN1MWP04001 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
OPN1MWP04001 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
OPN1MWP04001 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
OPN1MWP04001 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.02■□□□□ 0.63
OPN1MWP04001 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
OPN1MWP04001 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1MWP04001 AL139125.2-201ENST00000623134 1869 ntBASIC19.01■□□□□ 0.63
OPN1MWP04001 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1MWP04001 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1MWP04001 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
OPN1MWP04001 AC009299.2-201ENST00000482477 511 ntBASIC19.01■□□□□ 0.63
OPN1MWP04001 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.01■□□□□ 0.63
OPN1MWP04001 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1MWP04001 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1MWP04001 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1MWP04001 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
OPN1MWP04001 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
OPN1MWP04001 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
OPN1MWP04001 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
OPN1MWP04001 AL592295.1-201ENST00000400984 884 ntBASIC19■□□□□ 0.63
OPN1MWP04001 SPCS2P3-201ENST00000500401 656 ntBASIC19■□□□□ 0.63
OPN1MWP04001 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19■□□□□ 0.63
OPN1MWP04001 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19■□□□□ 0.63
OPN1MWP04001 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19■□□□□ 0.63
OPN1MWP04001 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1MWP04001 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1MWP04001 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
OPN1MWP04001 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.99■□□□□ 0.63
OPN1MWP04001 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.99■□□□□ 0.63
OPN1MWP04001 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.99■□□□□ 0.63
OPN1MWP04001 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
OPN1MWP04001 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
OPN1MWP04001 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
OPN1MWP04001 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
OPN1MWP04001 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
OPN1MWP04001 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
OPN1MWP04001 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
OPN1MWP04001 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1MWP04001 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1MWP04001 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.97■□□□□ 0.63
OPN1MWP04001 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.97■□□□□ 0.63
OPN1MWP04001 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1MWP04001 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1MWP04001 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1MWP04001 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1MWP04001 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1MWP04001 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
OPN1MWP04001 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1MWP04001 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.96■□□□□ 0.63
OPN1MWP04001 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1MWP04001 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
OPN1MWP04001 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1MWP04001 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1MWP04001 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
OPN1MWP04001 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1MWP04001 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1MWP04001 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.95■□□□□ 0.62
OPN1MWP04001 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1MWP04001 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1MWP04001 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1MWP04001 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.95■□□□□ 0.62
OPN1MWP04001 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1MWP04001 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.95■□□□□ 0.62
OPN1MWP04001 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1MWP04001 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1MWP04001 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
OPN1MWP04001 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPN1MWP04001 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.94■□□□□ 0.62
OPN1MWP04001 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPN1MWP04001 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
OPN1MWP04001 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
OPN1MWP04001 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
OPN1MWP04001 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.94■□□□□ 0.62
OPN1MWP04001 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms