Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
BEST1O76090 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.54■■□□□ 1.52
BEST1O76090 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
BEST1O76090 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BEST1O76090 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BEST1O76090 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.54■■□□□ 1.52
BEST1O76090 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.54■■□□□ 1.52
BEST1O76090 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.54■■□□□ 1.52
BEST1O76090 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BEST1O76090 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BEST1O76090 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
BEST1O76090 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
BEST1O76090 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
BEST1O76090 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.53■■□□□ 1.52
BEST1O76090 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.53■■□□□ 1.52
BEST1O76090 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.53■■□□□ 1.52
BEST1O76090 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
BEST1O76090 AC142381.3-201ENST00000568208 1670 ntBASIC24.53■■□□□ 1.52
BEST1O76090 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.52■■□□□ 1.52
BEST1O76090 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
BEST1O76090 UNC93B8-201ENST00000511903 705 ntBASIC24.52■■□□□ 1.52
BEST1O76090 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.52■■□□□ 1.52
BEST1O76090 AC092028.1-203ENST00000608262 953 ntBASIC24.52■■□□□ 1.52
BEST1O76090 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
BEST1O76090 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
BEST1O76090 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
BEST1O76090 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.51■■□□□ 1.51
BEST1O76090 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
BEST1O76090 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.51■■□□□ 1.51
BEST1O76090 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BEST1O76090 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BEST1O76090 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BEST1O76090 HLA-L-211ENST00000482052 1765 ntBASIC24.5■■□□□ 1.51
BEST1O76090 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.5■■□□□ 1.51
BEST1O76090 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
BEST1O76090 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
BEST1O76090 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
BEST1O76090 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
BEST1O76090 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.49■■□□□ 1.51
BEST1O76090 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.49■■□□□ 1.51
BEST1O76090 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
BEST1O76090 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
BEST1O76090 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.48■■□□□ 1.51
BEST1O76090 TSPY9P-201ENST00000440215 945 ntBASIC24.48■■□□□ 1.51
BEST1O76090 TSPY11P-201ENST00000442607 1045 ntBASIC24.48■■□□□ 1.51
BEST1O76090 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.48■■□□□ 1.51
BEST1O76090 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
BEST1O76090 AC135731.1-201ENST00000569415 2548 ntBASIC24.48■■□□□ 1.51
BEST1O76090 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
BEST1O76090 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.47■■□□□ 1.51
BEST1O76090 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.47■■□□□ 1.51
BEST1O76090 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
BEST1O76090 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.47■■□□□ 1.51
BEST1O76090 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.47■■□□□ 1.51
BEST1O76090 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
BEST1O76090 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
BEST1O76090 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
BEST1O76090 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
BEST1O76090 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
BEST1O76090 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.46■■□□□ 1.51
BEST1O76090 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
BEST1O76090 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
BEST1O76090 AL356441.2-201ENST00000443009 864 ntBASIC24.46■■□□□ 1.51
BEST1O76090 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
BEST1O76090 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.46■■□□□ 1.51
BEST1O76090 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
BEST1O76090 AP003733.4-201ENST00000623785 1697 ntBASIC24.46■■□□□ 1.51
BEST1O76090 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.46■■□□□ 1.51
BEST1O76090 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.45■■□□□ 1.5
BEST1O76090 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
BEST1O76090 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
BEST1O76090 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.45■■□□□ 1.5
BEST1O76090 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.45■■□□□ 1.5
BEST1O76090 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.45■■□□□ 1.5
BEST1O76090 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.45■■□□□ 1.5
BEST1O76090 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
BEST1O76090 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BEST1O76090 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.44■■□□□ 1.5
BEST1O76090 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
BEST1O76090 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.44■■□□□ 1.5
BEST1O76090 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.44■■□□□ 1.5
BEST1O76090 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.44■■□□□ 1.5
BEST1O76090 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.44■■□□□ 1.5
BEST1O76090 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BEST1O76090 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BEST1O76090 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BEST1O76090 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.44■■□□□ 1.5
BEST1O76090 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.44■■□□□ 1.5
BEST1O76090 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BEST1O76090 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.43■■□□□ 1.5
BEST1O76090 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
BEST1O76090 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
BEST1O76090 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
BEST1O76090 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.43■■□□□ 1.5
BEST1O76090 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.43■■□□□ 1.5
BEST1O76090 SNX5-217ENST00000606557 1087 ntBASIC24.43■■□□□ 1.5
BEST1O76090 AC131274.2-201ENST00000580697 1507 ntBASIC24.43■■□□□ 1.5
BEST1O76090 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
BEST1O76090 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.43■■□□□ 1.5
BEST1O76090 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms