Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.87■■□□□ 1.09
CLDN4O14493 AL035685.1-201ENST00000636663 812 ntBASIC21.87■■□□□ 1.09
CLDN4O14493 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN4O14493 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN4O14493 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN4O14493 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN4O14493 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN4O14493 KRT125P-201ENST00000546827 989 ntBASIC21.86■■□□□ 1.09
CLDN4O14493 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN4O14493 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN4O14493 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.85■■□□□ 1.09
CLDN4O14493 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN4O14493 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN4O14493 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN4O14493 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
CLDN4O14493 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDN4O14493 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN4O14493 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN4O14493 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.84■■□□□ 1.09
CLDN4O14493 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN4O14493 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN4O14493 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDN4O14493 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN4O14493 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN4O14493 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN4O14493 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN4O14493 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLDN4O14493 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.83■■□□□ 1.09
CLDN4O14493 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN4O14493 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN4O14493 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN4O14493 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CLDN4O14493 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN4O14493 AC239859.2-201ENST00000444165 318 ntBASIC21.82■■□□□ 1.08
CLDN4O14493 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN4O14493 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN4O14493 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN4O14493 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN4O14493 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLDN4O14493 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.81■■□□□ 1.08
CLDN4O14493 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN4O14493 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN4O14493 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN4O14493 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN4O14493 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CLDN4O14493 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.81■■□□□ 1.08
CLDN4O14493 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN4O14493 AF131216.4-201ENST00000638924 1588 ntBASIC21.81■■□□□ 1.08
CLDN4O14493 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN4O14493 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN4O14493 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN4O14493 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN4O14493 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLDN4O14493 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN4O14493 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN4O14493 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN4O14493 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN4O14493 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.8■■□□□ 1.08
CLDN4O14493 AC021242.3-201ENST00000607598 1377 ntBASIC21.8■■□□□ 1.08
CLDN4O14493 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CLDN4O14493 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLDN4O14493 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN4O14493 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.8■■□□□ 1.08
CLDN4O14493 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.8■■□□□ 1.08
CLDN4O14493 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN4O14493 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN4O14493 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN4O14493 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN4O14493 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN4O14493 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.79■■□□□ 1.08
CLDN4O14493 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN4O14493 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN4O14493 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CLDN4O14493 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN4O14493 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.79■■□□□ 1.08
CLDN4O14493 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CLDN4O14493 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.79■■□□□ 1.08
CLDN4O14493 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.79■■□□□ 1.08
CLDN4O14493 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.79■■□□□ 1.08
CLDN4O14493 HLA-L-211ENST00000482052 1765 ntBASIC21.79■■□□□ 1.08
CLDN4O14493 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN4O14493 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
CLDN4O14493 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.78■■□□□ 1.08
CLDN4O14493 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.78■■□□□ 1.08
CLDN4O14493 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.78■■□□□ 1.08
CLDN4O14493 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.78■■□□□ 1.08
CLDN4O14493 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN4O14493 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN4O14493 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN4O14493 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.77■■□□□ 1.08
CLDN4O14493 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CLDN4O14493 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN4O14493 MIR4787-201ENST00000607364 84 ntBASIC21.77■■□□□ 1.08
CLDN4O14493 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN4O14493 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.76■■□□□ 1.07
CLDN4O14493 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN4O14493 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN4O14493 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN4O14493 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN4O14493 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms