Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
TRBV5-5A0A0J9YX44 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-5A0A0J9YX44 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-5A0A0J9YX44 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 RAP2CP1-202ENST00000605179 643 ntBASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRBV5-5A0A0J9YX44 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBV5-5A0A0J9YX44 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV5-5A0A0J9YX44 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.17■□□□□ 0.82
TRBV5-5A0A0J9YX44 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.17■□□□□ 0.82
TRBV5-5A0A0J9YX44 AC007029.1-201ENST00000604183 313 ntBASIC20.17■□□□□ 0.82
TRBV5-5A0A0J9YX44 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.17■□□□□ 0.82
TRBV5-5A0A0J9YX44 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
TRBV5-5A0A0J9YX44 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV5-5A0A0J9YX44 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRBV5-5A0A0J9YX44 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV5-5A0A0J9YX44 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV5-5A0A0J9YX44 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TRBV5-5A0A0J9YX44 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 AC026202.3-201ENST00000600805 1127 ntBASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 AC022413.1-201ENST00000624602 984 ntBASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.13■□□□□ 0.81
TRBV5-5A0A0J9YX44 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.12■□□□□ 0.81
TRBV5-5A0A0J9YX44 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV5-5A0A0J9YX44 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TRBV5-5A0A0J9YX44 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.12■□□□□ 0.81
TRBV5-5A0A0J9YX44 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.12■□□□□ 0.81
TRBV5-5A0A0J9YX44 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV5-5A0A0J9YX44 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRBV5-5A0A0J9YX44 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRBV5-5A0A0J9YX44 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV5-5A0A0J9YX44 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms