Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRBV23-1A0A0A0MS06 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV23-1A0A0A0MS06 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.47■□□□□ 0.71
TRBV23-1A0A0A0MS06 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV23-1A0A0A0MS06 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 AC020928.2-201ENST00000588717 2197 ntBASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV23-1A0A0A0MS06 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 AC011551.1-201ENST00000614101 683 ntBASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 SLC6A10P-202ENST00000431994 2058 ntBASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRBV23-1A0A0A0MS06 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV23-1A0A0A0MS06 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV23-1A0A0A0MS06 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV23-1A0A0A0MS06 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV23-1A0A0A0MS06 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV23-1A0A0A0MS06 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV23-1A0A0A0MS06 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 KRT8P33-201ENST00000508125 1423 ntBASIC19.42■□□□□ 0.7
TRBV23-1A0A0A0MS06 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 AC103834.1-201ENST00000520383 144 ntBASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 MIR6089-201ENST00000616698 64 ntBASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV23-1A0A0A0MS06 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 KRT18P24-201ENST00000344739 1156 ntBASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.4■□□□□ 0.7
TRBV23-1A0A0A0MS06 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.39■□□□□ 0.7
TRBV23-1A0A0A0MS06 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TRBV23-1A0A0A0MS06 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV23-1A0A0A0MS06 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms