Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HRH3Q9Y5N1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
HRH3Q9Y5N1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.49■■□□□ 1.03
HRH3Q9Y5N1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HRH3Q9Y5N1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HRH3Q9Y5N1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HRH3Q9Y5N1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HRH3Q9Y5N1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
HRH3Q9Y5N1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.47■■□□□ 1.03
HRH3Q9Y5N1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.47■■□□□ 1.03
HRH3Q9Y5N1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HRH3Q9Y5N1 Z92544.1-202ENST00000571933 1220 ntBASIC21.47■■□□□ 1.03
HRH3Q9Y5N1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HRH3Q9Y5N1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HRH3Q9Y5N1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HRH3Q9Y5N1 AC020928.2-201ENST00000588717 2197 ntBASIC21.46■■□□□ 1.03
HRH3Q9Y5N1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.46■■□□□ 1.03
HRH3Q9Y5N1 AC120024.1-201ENST00000562672 995 ntBASIC21.46■■□□□ 1.03
HRH3Q9Y5N1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HRH3Q9Y5N1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HRH3Q9Y5N1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HRH3Q9Y5N1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HRH3Q9Y5N1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HRH3Q9Y5N1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HRH3Q9Y5N1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HRH3Q9Y5N1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HRH3Q9Y5N1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 KRT18P24-201ENST00000344739 1156 ntBASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 AC022616.5-201ENST00000518796 181 ntBASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.44■■□□□ 1.02
HRH3Q9Y5N1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HRH3Q9Y5N1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HRH3Q9Y5N1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HRH3Q9Y5N1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.42■■□□□ 1.02
HRH3Q9Y5N1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HRH3Q9Y5N1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.42■■□□□ 1.02
HRH3Q9Y5N1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.42■■□□□ 1.02
HRH3Q9Y5N1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.42■■□□□ 1.02
HRH3Q9Y5N1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.42■■□□□ 1.02
HRH3Q9Y5N1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.42■■□□□ 1.02
HRH3Q9Y5N1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HRH3Q9Y5N1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
HRH3Q9Y5N1 MIR4787-201ENST00000607364 84 ntBASIC21.4■■□□□ 1.02
HRH3Q9Y5N1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms