Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNX25Q9H3E2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SNX25Q9H3E2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNX25Q9H3E2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SNX25Q9H3E2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.93■■□□□ 1.58
SNX25Q9H3E2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
SNX25Q9H3E2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNX25Q9H3E2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNX25Q9H3E2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.93■■□□□ 1.58
SNX25Q9H3E2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
SNX25Q9H3E2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SNX25Q9H3E2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.91■■□□□ 1.58
SNX25Q9H3E2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.91■■□□□ 1.58
SNX25Q9H3E2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
SNX25Q9H3E2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.91■■□□□ 1.58
SNX25Q9H3E2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNX25Q9H3E2 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.91■■□□□ 1.58
SNX25Q9H3E2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SNX25Q9H3E2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SNX25Q9H3E2 MIR6089-201ENST00000616698 64 ntBASIC24.91■■□□□ 1.58
SNX25Q9H3E2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.91■■□□□ 1.58
SNX25Q9H3E2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNX25Q9H3E2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SNX25Q9H3E2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SNX25Q9H3E2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SNX25Q9H3E2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SNX25Q9H3E2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.89■■□□□ 1.58
SNX25Q9H3E2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.89■■□□□ 1.58
SNX25Q9H3E2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
SNX25Q9H3E2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SNX25Q9H3E2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.88■■□□□ 1.57
SNX25Q9H3E2 MIR4787-201ENST00000607364 84 ntBASIC24.88■■□□□ 1.57
SNX25Q9H3E2 AC022211.4-201ENST00000625094 2161 ntBASIC24.88■■□□□ 1.57
SNX25Q9H3E2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SNX25Q9H3E2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SNX25Q9H3E2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SNX25Q9H3E2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNX25Q9H3E2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNX25Q9H3E2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.87■■□□□ 1.57
SNX25Q9H3E2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.87■■□□□ 1.57
SNX25Q9H3E2 AC021242.3-201ENST00000607598 1377 ntBASIC24.87■■□□□ 1.57
SNX25Q9H3E2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNX25Q9H3E2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.87■■□□□ 1.57
SNX25Q9H3E2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.86■■□□□ 1.57
SNX25Q9H3E2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.86■■□□□ 1.57
SNX25Q9H3E2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SNX25Q9H3E2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.86■■□□□ 1.57
SNX25Q9H3E2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.86■■□□□ 1.57
SNX25Q9H3E2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.86■■□□□ 1.57
SNX25Q9H3E2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SNX25Q9H3E2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SNX25Q9H3E2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNX25Q9H3E2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNX25Q9H3E2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.85■■□□□ 1.57
SNX25Q9H3E2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNX25Q9H3E2 AF131216.4-201ENST00000638924 1588 ntBASIC24.84■■□□□ 1.57
SNX25Q9H3E2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SNX25Q9H3E2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.84■■□□□ 1.57
SNX25Q9H3E2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SNX25Q9H3E2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.84■■□□□ 1.57
SNX25Q9H3E2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.84■■□□□ 1.57
SNX25Q9H3E2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SNX25Q9H3E2 AC020928.2-201ENST00000588717 2197 ntBASIC24.84■■□□□ 1.57
SNX25Q9H3E2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SNX25Q9H3E2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 GUSBP5-201ENST00000418136 578 ntBASIC24.83■■□□□ 1.57
SNX25Q9H3E2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNX25Q9H3E2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SNX25Q9H3E2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SNX25Q9H3E2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
SNX25Q9H3E2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNX25Q9H3E2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNX25Q9H3E2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SNX25Q9H3E2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SNX25Q9H3E2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNX25Q9H3E2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SNX25Q9H3E2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SNX25Q9H3E2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SNX25Q9H3E2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.8■■□□□ 1.56
SNX25Q9H3E2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms