Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
RTFDC1Q9BY42 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RTFDC1Q9BY42 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
RTFDC1Q9BY42 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 AL136162.1-201ENST00000607711 1078 ntBASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
RTFDC1Q9BY42 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.74■■■□□ 2.19
RTFDC1Q9BY42 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
RTFDC1Q9BY42 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 AC135279.3-201ENST00000610945 1311 ntBASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 EDA-201ENST00000338901 1233 ntBASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
RTFDC1Q9BY42 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RTFDC1Q9BY42 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RTFDC1Q9BY42 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 SRD5A1P1-201ENST00000442297 786 ntBASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 AC024257.2-201ENST00000549699 147 ntBASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 AC092666.2-201ENST00000613287 246 ntBASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 AL355001.2-201ENST00000620617 1191 ntBASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.65■■■□□ 2.18
RTFDC1Q9BY42 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTFDC1Q9BY42 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTFDC1Q9BY42 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
RTFDC1Q9BY42 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTFDC1Q9BY42 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 AL136967.2-201ENST00000623968 743 ntBASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 AC004448.1-201ENST00000458332 883 ntBASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms