Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
ARHGEF28Q8N1W1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC32.93■■■□□ 2.86
ARHGEF28Q8N1W1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
ARHGEF28Q8N1W1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
ARHGEF28Q8N1W1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC32.92■■■□□ 2.86
ARHGEF28Q8N1W1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC32.92■■■□□ 2.86
ARHGEF28Q8N1W1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC32.91■■■□□ 2.86
ARHGEF28Q8N1W1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC32.91■■■□□ 2.86
ARHGEF28Q8N1W1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
ARHGEF28Q8N1W1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
ARHGEF28Q8N1W1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
ARHGEF28Q8N1W1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
ARHGEF28Q8N1W1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
ARHGEF28Q8N1W1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
ARHGEF28Q8N1W1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC32.9■■■□□ 2.86
ARHGEF28Q8N1W1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC32.89■■■□□ 2.86
ARHGEF28Q8N1W1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC32.89■■■□□ 2.86
ARHGEF28Q8N1W1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
ARHGEF28Q8N1W1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.85
ARHGEF28Q8N1W1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC32.88■■■□□ 2.85
ARHGEF28Q8N1W1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
ARHGEF28Q8N1W1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
ARHGEF28Q8N1W1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
ARHGEF28Q8N1W1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
ARHGEF28Q8N1W1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC32.87■■■□□ 2.85
ARHGEF28Q8N1W1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC32.87■■■□□ 2.85
ARHGEF28Q8N1W1 AK3-203ENST00000447596 705 ntTSL 2 BASIC32.86■■■□□ 2.85
ARHGEF28Q8N1W1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
ARHGEF28Q8N1W1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
ARHGEF28Q8N1W1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
ARHGEF28Q8N1W1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC32.85■■■□□ 2.85
ARHGEF28Q8N1W1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
ARHGEF28Q8N1W1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
ARHGEF28Q8N1W1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC32.84■■■□□ 2.85
ARHGEF28Q8N1W1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
ARHGEF28Q8N1W1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC32.82■■■□□ 2.84
ARHGEF28Q8N1W1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
ARHGEF28Q8N1W1 LBH-205ENST00000407930 756 ntTSL 2 BASIC32.82■■■□□ 2.84
ARHGEF28Q8N1W1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC32.82■■■□□ 2.84
ARHGEF28Q8N1W1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC32.82■■■□□ 2.84
ARHGEF28Q8N1W1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC32.82■■■□□ 2.84
ARHGEF28Q8N1W1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
ARHGEF28Q8N1W1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
ARHGEF28Q8N1W1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
ARHGEF28Q8N1W1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
ARHGEF28Q8N1W1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC32.8■■■□□ 2.84
ARHGEF28Q8N1W1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC32.8■■■□□ 2.84
ARHGEF28Q8N1W1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC32.8■■■□□ 2.84
ARHGEF28Q8N1W1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC32.8■■■□□ 2.84
ARHGEF28Q8N1W1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
ARHGEF28Q8N1W1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
ARHGEF28Q8N1W1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
ARHGEF28Q8N1W1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC32.8■■■□□ 2.84
ARHGEF28Q8N1W1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
ARHGEF28Q8N1W1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC32.79■■■□□ 2.84
ARHGEF28Q8N1W1 AL356740.2-201ENST00000601559 647 ntBASIC32.79■■■□□ 2.84
ARHGEF28Q8N1W1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
ARHGEF28Q8N1W1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC32.79■■■□□ 2.84
ARHGEF28Q8N1W1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
ARHGEF28Q8N1W1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
ARHGEF28Q8N1W1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
ARHGEF28Q8N1W1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
ARHGEF28Q8N1W1 AL139246.5-201ENST00000606645 996 ntBASIC32.78■■■□□ 2.84
ARHGEF28Q8N1W1 MIR6089-201ENST00000616698 64 ntBASIC32.78■■■□□ 2.84
ARHGEF28Q8N1W1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC32.78■■■□□ 2.84
ARHGEF28Q8N1W1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC32.77■■■□□ 2.84
ARHGEF28Q8N1W1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC32.77■■■□□ 2.84
ARHGEF28Q8N1W1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC32.77■■■□□ 2.84
ARHGEF28Q8N1W1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
ARHGEF28Q8N1W1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC32.77■■■□□ 2.84
ARHGEF28Q8N1W1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
ARHGEF28Q8N1W1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
ARHGEF28Q8N1W1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
ARHGEF28Q8N1W1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC32.77■■■□□ 2.84
ARHGEF28Q8N1W1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
ARHGEF28Q8N1W1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
ARHGEF28Q8N1W1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
ARHGEF28Q8N1W1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
ARHGEF28Q8N1W1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
ARHGEF28Q8N1W1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC32.75■■■□□ 2.83
ARHGEF28Q8N1W1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
ARHGEF28Q8N1W1 AC131274.2-201ENST00000580697 1507 ntBASIC32.75■■■□□ 2.83
ARHGEF28Q8N1W1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
ARHGEF28Q8N1W1 RALB-208ENST00000631312 311 ntTSL 5 BASIC32.74■■■□□ 2.83
ARHGEF28Q8N1W1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC32.74■■■□□ 2.83
ARHGEF28Q8N1W1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
ARHGEF28Q8N1W1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
ARHGEF28Q8N1W1 DUSP8P4-201ENST00000399538 1761 ntBASIC32.74■■■□□ 2.83
ARHGEF28Q8N1W1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC32.74■■■□□ 2.83
ARHGEF28Q8N1W1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
ARHGEF28Q8N1W1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
ARHGEF28Q8N1W1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
ARHGEF28Q8N1W1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
ARHGEF28Q8N1W1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ARHGEF28Q8N1W1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
ARHGEF28Q8N1W1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC32.73■■■□□ 2.83
ARHGEF28Q8N1W1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
ARHGEF28Q8N1W1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
ARHGEF28Q8N1W1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
ARHGEF28Q8N1W1 AC096631.2-201ENST00000436136 790 ntBASIC32.71■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms