Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC090877.2-201ENST00000558441 1738 ntBASIC22.4■■□□□ 1.18
COL27A1Q8IZC6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL27A1Q8IZC6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
COL27A1Q8IZC6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL27A1Q8IZC6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL27A1Q8IZC6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL27A1Q8IZC6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL27A1Q8IZC6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL27A1Q8IZC6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
COL27A1Q8IZC6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.39■■□□□ 1.18
COL27A1Q8IZC6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL27A1Q8IZC6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL27A1Q8IZC6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.39■■□□□ 1.17
COL27A1Q8IZC6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.39■■□□□ 1.17
COL27A1Q8IZC6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL27A1Q8IZC6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL27A1Q8IZC6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.39■■□□□ 1.17
COL27A1Q8IZC6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.39■■□□□ 1.17
COL27A1Q8IZC6 MIR6722-201ENST00000617286 78 ntBASIC22.39■■□□□ 1.17
COL27A1Q8IZC6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL27A1Q8IZC6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL27A1Q8IZC6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL27A1Q8IZC6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL27A1Q8IZC6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL27A1Q8IZC6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.38■■□□□ 1.17
COL27A1Q8IZC6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL27A1Q8IZC6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL27A1Q8IZC6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL27A1Q8IZC6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL27A1Q8IZC6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
COL27A1Q8IZC6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL27A1Q8IZC6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.37■■□□□ 1.17
COL27A1Q8IZC6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.37■■□□□ 1.17
COL27A1Q8IZC6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.37■■□□□ 1.17
COL27A1Q8IZC6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.36■■□□□ 1.17
COL27A1Q8IZC6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL27A1Q8IZC6 AC097639.1-201ENST00000565519 1891 ntBASIC22.36■■□□□ 1.17
COL27A1Q8IZC6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL27A1Q8IZC6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL27A1Q8IZC6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL27A1Q8IZC6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.35■■□□□ 1.17
COL27A1Q8IZC6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL27A1Q8IZC6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL27A1Q8IZC6 AC135279.3-201ENST00000610945 1311 ntBASIC22.33■■□□□ 1.17
COL27A1Q8IZC6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL27A1Q8IZC6 UNC93B3-201ENST00000308076 687 ntBASIC22.33■■□□□ 1.17
COL27A1Q8IZC6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL27A1Q8IZC6 AC024257.2-201ENST00000549699 147 ntBASIC22.33■■□□□ 1.17
COL27A1Q8IZC6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
COL27A1Q8IZC6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
COL27A1Q8IZC6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 PBX2P1-201ENST00000493219 1291 ntBASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL27A1Q8IZC6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.31■■□□□ 1.16
COL27A1Q8IZC6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
COL27A1Q8IZC6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL27A1Q8IZC6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL27A1Q8IZC6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 AC142381.2-201ENST00000566120 298 ntBASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
COL27A1Q8IZC6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL27A1Q8IZC6 AC010501.1-201ENST00000606270 1962 ntBASIC22.29■■□□□ 1.16
COL27A1Q8IZC6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL27A1Q8IZC6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.29■■□□□ 1.16
COL27A1Q8IZC6 AL136162.1-201ENST00000607711 1078 ntBASIC22.29■■□□□ 1.16
COL27A1Q8IZC6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL27A1Q8IZC6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
COL27A1Q8IZC6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL27A1Q8IZC6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL27A1Q8IZC6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.28■■□□□ 1.16
COL27A1Q8IZC6 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms