Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.41■■□□□ 1.82
CCDC62Q6P9F0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CCDC62Q6P9F0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC62Q6P9F0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CCDC62Q6P9F0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC62Q6P9F0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC62Q6P9F0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCDC62Q6P9F0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.41■■□□□ 1.82
CCDC62Q6P9F0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.4■■□□□ 1.82
CCDC62Q6P9F0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.4■■□□□ 1.82
CCDC62Q6P9F0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.4■■□□□ 1.82
CCDC62Q6P9F0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.4■■□□□ 1.82
CCDC62Q6P9F0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CCDC62Q6P9F0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC62Q6P9F0 AC092803.2-201ENST00000564287 1899 ntBASIC26.39■■□□□ 1.82
CCDC62Q6P9F0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC62Q6P9F0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC62Q6P9F0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC62Q6P9F0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
CCDC62Q6P9F0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC62Q6P9F0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC62Q6P9F0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC62Q6P9F0 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.37■■□□□ 1.81
CCDC62Q6P9F0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC62Q6P9F0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC62Q6P9F0 AL356740.2-201ENST00000601559 647 ntBASIC26.37■■□□□ 1.81
CCDC62Q6P9F0 SNX5-217ENST00000606557 1087 ntBASIC26.37■■□□□ 1.81
CCDC62Q6P9F0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 MIR4466-201ENST00000606121 54 ntBASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC62Q6P9F0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC62Q6P9F0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CCDC62Q6P9F0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC62Q6P9F0 AL136116.3-201ENST00000402907 1138 ntBASIC26.35■■□□□ 1.81
CCDC62Q6P9F0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC62Q6P9F0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC62Q6P9F0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC62Q6P9F0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC62Q6P9F0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC62Q6P9F0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.34■■□□□ 1.81
CCDC62Q6P9F0 AL512631.2-201ENST00000604634 923 ntBASIC26.34■■□□□ 1.81
CCDC62Q6P9F0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC62Q6P9F0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC62Q6P9F0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CCDC62Q6P9F0 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC62Q6P9F0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.33■■□□□ 1.81
CCDC62Q6P9F0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC62Q6P9F0 MIR6722-201ENST00000617286 78 ntBASIC26.33■■□□□ 1.81
CCDC62Q6P9F0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC62Q6P9F0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC62Q6P9F0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC62Q6P9F0 MIR638-201ENST00000385237 100 ntBASIC26.32■■□□□ 1.8
CCDC62Q6P9F0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
CCDC62Q6P9F0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.32■■□□□ 1.8
CCDC62Q6P9F0 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.32■■□□□ 1.8
CCDC62Q6P9F0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
CCDC62Q6P9F0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC62Q6P9F0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC62Q6P9F0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.31■■□□□ 1.8
CCDC62Q6P9F0 AL139246.5-201ENST00000606645 996 ntBASIC26.31■■□□□ 1.8
CCDC62Q6P9F0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.31■■□□□ 1.8
CCDC62Q6P9F0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.31■■□□□ 1.8
CCDC62Q6P9F0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CCDC62Q6P9F0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC62Q6P9F0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC62Q6P9F0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CCDC62Q6P9F0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC62Q6P9F0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CCDC62Q6P9F0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC62Q6P9F0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.3■■□□□ 1.8
CCDC62Q6P9F0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC62Q6P9F0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC62Q6P9F0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
CCDC62Q6P9F0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC62Q6P9F0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC62Q6P9F0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.29■■□□□ 1.8
CCDC62Q6P9F0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CCDC62Q6P9F0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CCDC62Q6P9F0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CCDC62Q6P9F0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC62Q6P9F0 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC62Q6P9F0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC62Q6P9F0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC62Q6P9F0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC62Q6P9F0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC62Q6P9F0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC62Q6P9F0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC62Q6P9F0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC62Q6P9F0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC62Q6P9F0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC62Q6P9F0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.26■■□□□ 1.79
CCDC62Q6P9F0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms