Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CCDC30Q5VVM6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.94■■■□□ 2.38
CCDC30Q5VVM6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CCDC30Q5VVM6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CCDC30Q5VVM6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CCDC30Q5VVM6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.93■■■□□ 2.38
CCDC30Q5VVM6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.93■■■□□ 2.38
CCDC30Q5VVM6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
CCDC30Q5VVM6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CCDC30Q5VVM6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
CCDC30Q5VVM6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CCDC30Q5VVM6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.92■■■□□ 2.38
CCDC30Q5VVM6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
CCDC30Q5VVM6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
CCDC30Q5VVM6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CCDC30Q5VVM6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CCDC30Q5VVM6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
CCDC30Q5VVM6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC30Q5VVM6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC30Q5VVM6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC30Q5VVM6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC30Q5VVM6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC30Q5VVM6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.9■■■□□ 2.38
CCDC30Q5VVM6 AC092028.1-203ENST00000608262 953 ntBASIC29.9■■■□□ 2.38
CCDC30Q5VVM6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC29.9■■■□□ 2.38
CCDC30Q5VVM6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC30Q5VVM6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC30Q5VVM6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.9■■■□□ 2.38
CCDC30Q5VVM6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC30Q5VVM6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.89■■■□□ 2.38
CCDC30Q5VVM6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC29.89■■■□□ 2.38
CCDC30Q5VVM6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.89■■■□□ 2.38
CCDC30Q5VVM6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CCDC30Q5VVM6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
CCDC30Q5VVM6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.89■■■□□ 2.38
CCDC30Q5VVM6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.89■■■□□ 2.38
CCDC30Q5VVM6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
CCDC30Q5VVM6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.89■■■□□ 2.37
CCDC30Q5VVM6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.89■■■□□ 2.37
CCDC30Q5VVM6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
CCDC30Q5VVM6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC30Q5VVM6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC30Q5VVM6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC30Q5VVM6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC30Q5VVM6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC30Q5VVM6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
CCDC30Q5VVM6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.87■■■□□ 2.37
CCDC30Q5VVM6 UNC93B8-201ENST00000511903 705 ntBASIC29.86■■■□□ 2.37
CCDC30Q5VVM6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC29.86■■■□□ 2.37
CCDC30Q5VVM6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
CCDC30Q5VVM6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
CCDC30Q5VVM6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC30Q5VVM6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.86■■■□□ 2.37
CCDC30Q5VVM6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.86■■■□□ 2.37
CCDC30Q5VVM6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC30Q5VVM6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC30Q5VVM6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.85■■■□□ 2.37
CCDC30Q5VVM6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.85■■■□□ 2.37
CCDC30Q5VVM6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC30Q5VVM6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC30Q5VVM6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC30Q5VVM6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.85■■■□□ 2.37
CCDC30Q5VVM6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC30Q5VVM6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.85■■■□□ 2.37
CCDC30Q5VVM6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
CCDC30Q5VVM6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC30Q5VVM6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC30Q5VVM6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC30Q5VVM6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.84■■■□□ 2.37
CCDC30Q5VVM6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC29.84■■■□□ 2.37
CCDC30Q5VVM6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.84■■■□□ 2.37
CCDC30Q5VVM6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
CCDC30Q5VVM6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.84■■■□□ 2.37
CCDC30Q5VVM6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 AC022211.4-201ENST00000625094 2161 ntBASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 AL356441.2-201ENST00000443009 864 ntBASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC30Q5VVM6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC30Q5VVM6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.82■■■□□ 2.36
CCDC30Q5VVM6 TSPY9P-201ENST00000440215 945 ntBASIC29.82■■■□□ 2.36
CCDC30Q5VVM6 TSPY11P-201ENST00000442607 1045 ntBASIC29.82■■■□□ 2.36
CCDC30Q5VVM6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
CCDC30Q5VVM6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
CCDC30Q5VVM6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC30Q5VVM6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.82■■■□□ 2.36
CCDC30Q5VVM6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC29.82■■■□□ 2.36
CCDC30Q5VVM6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.81■■■□□ 2.36
CCDC30Q5VVM6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.81■■■□□ 2.36
CCDC30Q5VVM6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC30Q5VVM6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC30Q5VVM6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.8■■■□□ 2.36
CCDC30Q5VVM6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC30Q5VVM6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.8■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms