Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ERN1-208ENST00000606895 2068 ntBASIC36.02■■■■□ 3.36
CDC42BPAQ5VT25 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC36.01■■■■□ 3.36
CDC42BPAQ5VT25 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC36.01■■■■□ 3.35
CDC42BPAQ5VT25 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
CDC42BPAQ5VT25 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
CDC42BPAQ5VT25 MIR6722-201ENST00000617286 78 ntBASIC36■■■■□ 3.35
CDC42BPAQ5VT25 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC35.99■■■■□ 3.35
CDC42BPAQ5VT25 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC35.99■■■■□ 3.35
CDC42BPAQ5VT25 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CDC42BPAQ5VT25 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CDC42BPAQ5VT25 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC35.98■■■■□ 3.35
CDC42BPAQ5VT25 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC35.98■■■■□ 3.35
CDC42BPAQ5VT25 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC35.98■■■■□ 3.35
CDC42BPAQ5VT25 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
CDC42BPAQ5VT25 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
CDC42BPAQ5VT25 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC35.97■■■■□ 3.35
CDC42BPAQ5VT25 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
CDC42BPAQ5VT25 LBH-205ENST00000407930 756 ntTSL 2 BASIC35.97■■■■□ 3.35
CDC42BPAQ5VT25 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
CDC42BPAQ5VT25 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
CDC42BPAQ5VT25 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC35.96■■■■□ 3.35
CDC42BPAQ5VT25 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
CDC42BPAQ5VT25 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC35.95■■■■□ 3.35
CDC42BPAQ5VT25 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
CDC42BPAQ5VT25 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC35.95■■■■□ 3.35
CDC42BPAQ5VT25 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
CDC42BPAQ5VT25 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC35.95■■■■□ 3.34
CDC42BPAQ5VT25 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC35.95■■■■□ 3.34
CDC42BPAQ5VT25 EBPL-204ENST00000378272 766 ntTSL 3 BASIC35.94■■■■□ 3.34
CDC42BPAQ5VT25 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC35.94■■■■□ 3.34
CDC42BPAQ5VT25 AC097639.1-201ENST00000565519 1891 ntBASIC35.94■■■■□ 3.34
CDC42BPAQ5VT25 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC35.93■■■■□ 3.34
CDC42BPAQ5VT25 AC026271.2-201ENST00000428091 497 ntBASIC35.93■■■■□ 3.34
CDC42BPAQ5VT25 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC35.93■■■■□ 3.34
CDC42BPAQ5VT25 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC35.92■■■■□ 3.34
CDC42BPAQ5VT25 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC35.92■■■■□ 3.34
CDC42BPAQ5VT25 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
CDC42BPAQ5VT25 SHF-206ENST00000560471 2499 ntTSL 5 BASIC35.91■■■■□ 3.34
CDC42BPAQ5VT25 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC35.91■■■■□ 3.34
CDC42BPAQ5VT25 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC35.91■■■■□ 3.34
CDC42BPAQ5VT25 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC35.91■■■■□ 3.34
CDC42BPAQ5VT25 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CDC42BPAQ5VT25 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
CDC42BPAQ5VT25 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC35.89■■■■□ 3.34
CDC42BPAQ5VT25 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC35.88■■■■□ 3.34
CDC42BPAQ5VT25 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
CDC42BPAQ5VT25 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC35.88■■■■□ 3.33
CDC42BPAQ5VT25 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC35.88■■■■□ 3.33
CDC42BPAQ5VT25 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC35.88■■■■□ 3.33
CDC42BPAQ5VT25 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC35.88■■■■□ 3.33
CDC42BPAQ5VT25 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC35.88■■■■□ 3.33
CDC42BPAQ5VT25 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC35.88■■■■□ 3.33
CDC42BPAQ5VT25 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC35.88■■■■□ 3.33
CDC42BPAQ5VT25 AC010501.1-201ENST00000606270 1962 ntBASIC35.87■■■■□ 3.33
CDC42BPAQ5VT25 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC35.87■■■■□ 3.33
CDC42BPAQ5VT25 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
CDC42BPAQ5VT25 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC35.87■■■■□ 3.33
CDC42BPAQ5VT25 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC35.86■■■■□ 3.33
CDC42BPAQ5VT25 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC35.86■■■■□ 3.33
CDC42BPAQ5VT25 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
CDC42BPAQ5VT25 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
CDC42BPAQ5VT25 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
CDC42BPAQ5VT25 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC35.86■■■■□ 3.33
CDC42BPAQ5VT25 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC35.85■■■■□ 3.33
CDC42BPAQ5VT25 AC135279.3-201ENST00000610945 1311 ntBASIC35.85■■■■□ 3.33
CDC42BPAQ5VT25 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC35.85■■■■□ 3.33
CDC42BPAQ5VT25 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC35.85■■■■□ 3.33
CDC42BPAQ5VT25 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
CDC42BPAQ5VT25 LGR4-203ENST00000480977 492 ntTSL 2 BASIC35.85■■■■□ 3.33
CDC42BPAQ5VT25 PBX2P1-201ENST00000493219 1291 ntBASIC35.85■■■■□ 3.33
CDC42BPAQ5VT25 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC35.85■■■■□ 3.33
CDC42BPAQ5VT25 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC35.84■■■■□ 3.33
CDC42BPAQ5VT25 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC35.84■■■■□ 3.33
CDC42BPAQ5VT25 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 UNC93B3-201ENST00000308076 687 ntBASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 AC024257.2-201ENST00000549699 147 ntBASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 AL136162.1-201ENST00000607711 1078 ntBASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 AC142381.2-201ENST00000566120 298 ntBASIC35.83■■■■□ 3.33
CDC42BPAQ5VT25 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC35.82■■■■□ 3.32
CDC42BPAQ5VT25 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
CDC42BPAQ5VT25 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC35.82■■■■□ 3.32
CDC42BPAQ5VT25 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC35.82■■■■□ 3.32
CDC42BPAQ5VT25 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
CDC42BPAQ5VT25 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC35.81■■■■□ 3.32
CDC42BPAQ5VT25 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
CDC42BPAQ5VT25 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC35.8■■■■□ 3.32
CDC42BPAQ5VT25 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC35.8■■■■□ 3.32
CDC42BPAQ5VT25 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
CDC42BPAQ5VT25 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC35.8■■■■□ 3.32
CDC42BPAQ5VT25 PKM-203ENST00000389093 2279 ntTSL 5 BASIC35.8■■■■□ 3.32
CDC42BPAQ5VT25 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC35.8■■■■□ 3.32
CDC42BPAQ5VT25 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC35.8■■■■□ 3.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms