Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APOC4P55056 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.14■□□□□ 0.33
APOC4P55056 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APOC4P55056 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APOC4P55056 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOC4P55056 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOC4P55056 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOC4P55056 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOC4P55056 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOC4P55056 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOC4P55056 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.13■□□□□ 0.33
APOC4P55056 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOC4P55056 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOC4P55056 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APOC4P55056 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APOC4P55056 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
APOC4P55056 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOC4P55056 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.12■□□□□ 0.33
APOC4P55056 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOC4P55056 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOC4P55056 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
APOC4P55056 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.12■□□□□ 0.33
APOC4P55056 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOC4P55056 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.12■□□□□ 0.33
APOC4P55056 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APOC4P55056 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APOC4P55056 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.11■□□□□ 0.33
APOC4P55056 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
APOC4P55056 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
APOC4P55056 AC091060.1-201ENST00000623524 1766 ntBASIC17.11■□□□□ 0.33
APOC4P55056 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.11■□□□□ 0.33
APOC4P55056 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
APOC4P55056 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.11■□□□□ 0.33
APOC4P55056 UNC93B8-201ENST00000511903 705 ntBASIC17.11■□□□□ 0.33
APOC4P55056 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC4P55056 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
APOC4P55056 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
APOC4P55056 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOC4P55056 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
APOC4P55056 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
APOC4P55056 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.1■□□□□ 0.33
APOC4P55056 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC4P55056 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.1■□□□□ 0.33
APOC4P55056 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.1■□□□□ 0.33
APOC4P55056 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.1■□□□□ 0.33
APOC4P55056 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC4P55056 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.1■□□□□ 0.33
APOC4P55056 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
APOC4P55056 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
APOC4P55056 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
APOC4P55056 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC4P55056 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC4P55056 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC4P55056 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.09■□□□□ 0.33
APOC4P55056 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.09■□□□□ 0.33
APOC4P55056 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.09■□□□□ 0.33
APOC4P55056 AC010997.5-201ENST00000609182 354 ntBASIC17.09■□□□□ 0.33
APOC4P55056 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOC4P55056 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APOC4P55056 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.09■□□□□ 0.33
APOC4P55056 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APOC4P55056 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
APOC4P55056 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
APOC4P55056 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
APOC4P55056 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APOC4P55056 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.08■□□□□ 0.32
APOC4P55056 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOC4P55056 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APOC4P55056 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.08■□□□□ 0.32
APOC4P55056 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APOC4P55056 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
APOC4P55056 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APOC4P55056 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.07■□□□□ 0.32
APOC4P55056 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.07■□□□□ 0.32
APOC4P55056 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.07■□□□□ 0.32
APOC4P55056 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.07■□□□□ 0.32
APOC4P55056 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
APOC4P55056 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.07■□□□□ 0.32
APOC4P55056 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.07■□□□□ 0.32
APOC4P55056 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APOC4P55056 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APOC4P55056 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APOC4P55056 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
APOC4P55056 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.07■□□□□ 0.32
APOC4P55056 AF131216.4-201ENST00000638924 1588 ntBASIC17.06■□□□□ 0.32
APOC4P55056 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC4P55056 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.06■□□□□ 0.32
APOC4P55056 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.06■□□□□ 0.32
APOC4P55056 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC4P55056 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC4P55056 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.06■□□□□ 0.32
APOC4P55056 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC4P55056 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APOC4P55056 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOC4P55056 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
APOC4P55056 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APOC4P55056 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APOC4P55056 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.04■□□□□ 0.32
APOC4P55056 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APOC4P55056 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms