Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1A1P48729 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK1A1P48729 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1A1P48729 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CSNK1A1P48729 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1A1P48729 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CSNK1A1P48729 AC022616.5-201ENST00000518796 181 ntBASIC20.73■□□□□ 0.91
CSNK1A1P48729 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK1A1P48729 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.73■□□□□ 0.91
CSNK1A1P48729 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK1A1P48729 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.73■□□□□ 0.91
CSNK1A1P48729 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1A1P48729 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1A1P48729 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1A1P48729 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.72■□□□□ 0.91
CSNK1A1P48729 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1A1P48729 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1A1P48729 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1A1P48729 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1A1P48729 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1A1P48729 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1A1P48729 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1A1P48729 AL139125.2-201ENST00000623134 1869 ntBASIC20.72■□□□□ 0.91
CSNK1A1P48729 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1A1P48729 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1A1P48729 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK1A1P48729 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.72■□□□□ 0.91
CSNK1A1P48729 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1A1P48729 AC090877.2-201ENST00000558441 1738 ntBASIC20.71■□□□□ 0.91
CSNK1A1P48729 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.71■□□□□ 0.91
CSNK1A1P48729 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1A1P48729 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1A1P48729 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK1A1P48729 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1A1P48729 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK1A1P48729 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CSNK1A1P48729 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CSNK1A1P48729 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1A1P48729 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1A1P48729 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1A1P48729 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CSNK1A1P48729 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK1A1P48729 PVT1_1.1-201ENST00000615125 194 ntBASIC20.7■□□□□ 0.9
CSNK1A1P48729 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1A1P48729 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1A1P48729 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK1A1P48729 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK1A1P48729 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1A1P48729 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1A1P48729 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.69■□□□□ 0.9
CSNK1A1P48729 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.69■□□□□ 0.9
CSNK1A1P48729 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CSNK1A1P48729 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CSNK1A1P48729 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.69■□□□□ 0.9
CSNK1A1P48729 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.69■□□□□ 0.9
CSNK1A1P48729 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1A1P48729 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1A1P48729 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CSNK1A1P48729 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1A1P48729 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CSNK1A1P48729 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1A1P48729 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSNK1A1P48729 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1A1P48729 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CSNK1A1P48729 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.68■□□□□ 0.9
CSNK1A1P48729 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSNK1A1P48729 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.68■□□□□ 0.9
CSNK1A1P48729 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CSNK1A1P48729 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.68■□□□□ 0.9
CSNK1A1P48729 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1A1P48729 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CSNK1A1P48729 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1A1P48729 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1A1P48729 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.67■□□□□ 0.9
CSNK1A1P48729 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1A1P48729 AC011551.1-201ENST00000614101 683 ntBASIC20.67■□□□□ 0.9
CSNK1A1P48729 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CSNK1A1P48729 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.67■□□□□ 0.9
CSNK1A1P48729 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1A1P48729 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1A1P48729 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1A1P48729 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
CSNK1A1P48729 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
CSNK1A1P48729 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.66■□□□□ 0.9
CSNK1A1P48729 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.66■□□□□ 0.9
CSNK1A1P48729 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CSNK1A1P48729 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.66■□□□□ 0.9
CSNK1A1P48729 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1A1P48729 LINC01124-201ENST00000409786 2117 ntBASIC20.65■□□□□ 0.9
CSNK1A1P48729 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CSNK1A1P48729 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1A1P48729 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1A1P48729 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1A1P48729 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CSNK1A1P48729 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1A1P48729 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1A1P48729 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CSNK1A1P48729 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CSNK1A1P48729 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.64■□□□□ 0.9
CSNK1A1P48729 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms