Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CCNYL3P0C7X3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.43■■□□□ 1.18
CCNYL3P0C7X3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.43■■□□□ 1.18
CCNYL3P0C7X3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNYL3P0C7X3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.43■■□□□ 1.18
CCNYL3P0C7X3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNYL3P0C7X3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCNYL3P0C7X3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCNYL3P0C7X3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.42■■□□□ 1.18
CCNYL3P0C7X3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.42■■□□□ 1.18
CCNYL3P0C7X3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCNYL3P0C7X3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCNYL3P0C7X3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCNYL3P0C7X3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.41■■□□□ 1.18
CCNYL3P0C7X3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.41■■□□□ 1.18
CCNYL3P0C7X3 MIR4281-201ENST00000580852 62 ntBASIC22.41■■□□□ 1.18
CCNYL3P0C7X3 AC011551.1-201ENST00000614101 683 ntBASIC22.41■■□□□ 1.18
CCNYL3P0C7X3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.41■■□□□ 1.18
CCNYL3P0C7X3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.41■■□□□ 1.18
CCNYL3P0C7X3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.4■■□□□ 1.18
CCNYL3P0C7X3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCNYL3P0C7X3 AC092028.1-203ENST00000608262 953 ntBASIC22.4■■□□□ 1.18
CCNYL3P0C7X3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CCNYL3P0C7X3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.4■■□□□ 1.18
CCNYL3P0C7X3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.39■■□□□ 1.18
CCNYL3P0C7X3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.39■■□□□ 1.18
CCNYL3P0C7X3 AC019069.1-201ENST00000610008 1333 ntBASIC22.39■■□□□ 1.18
CCNYL3P0C7X3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CCNYL3P0C7X3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCNYL3P0C7X3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.39■■□□□ 1.17
CCNYL3P0C7X3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.39■■□□□ 1.17
CCNYL3P0C7X3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCNYL3P0C7X3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCNYL3P0C7X3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCNYL3P0C7X3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 ERN1-208ENST00000606895 2068 ntBASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 AC010501.1-201ENST00000606270 1962 ntBASIC22.38■■□□□ 1.17
CCNYL3P0C7X3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCNYL3P0C7X3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.37■■□□□ 1.17
CCNYL3P0C7X3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCNYL3P0C7X3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.37■■□□□ 1.17
CCNYL3P0C7X3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.37■■□□□ 1.17
CCNYL3P0C7X3 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.37■■□□□ 1.17
CCNYL3P0C7X3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCNYL3P0C7X3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCNYL3P0C7X3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCNYL3P0C7X3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CCNYL3P0C7X3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.35■■□□□ 1.17
CCNYL3P0C7X3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.35■■□□□ 1.17
CCNYL3P0C7X3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CCNYL3P0C7X3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNYL3P0C7X3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNYL3P0C7X3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCNYL3P0C7X3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.34■■□□□ 1.17
CCNYL3P0C7X3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCNYL3P0C7X3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.34■■□□□ 1.17
CCNYL3P0C7X3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.34■■□□□ 1.17
CCNYL3P0C7X3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCNYL3P0C7X3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.33■■□□□ 1.17
CCNYL3P0C7X3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CCNYL3P0C7X3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.33■■□□□ 1.17
CCNYL3P0C7X3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.33■■□□□ 1.17
CCNYL3P0C7X3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.33■■□□□ 1.17
CCNYL3P0C7X3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CCNYL3P0C7X3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CCNYL3P0C7X3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCNYL3P0C7X3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.32■■□□□ 1.16
CCNYL3P0C7X3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.32■■□□□ 1.16
CCNYL3P0C7X3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CCNYL3P0C7X3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CCNYL3P0C7X3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 AC010997.5-201ENST00000609182 354 ntBASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
CCNYL3P0C7X3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms