Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
P04436 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.37■■□□□ 1.01
P04436 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P04436 SLC6A10P-202ENST00000431994 2058 ntBASIC21.36■■□□□ 1.01
P04436 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
P04436 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P04436 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
P04436 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
P04436 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.36■■□□□ 1.01
P04436 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.36■■□□□ 1.01
P04436 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.36■■□□□ 1.01
P04436 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
P04436 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
P04436 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P04436 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P04436 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P04436 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.35■■□□□ 1.01
P04436 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.35■■□□□ 1.01
P04436 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.35■■□□□ 1.01
P04436 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.35■■□□□ 1.01
P04436 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.35■■□□□ 1.01
P04436 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
P04436 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.35■■□□□ 1.01
P04436 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
P04436 KRT16P3-201ENST00000439127 1283 ntBASIC21.34■■□□□ 1.01
P04436 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.34■■□□□ 1.01
P04436 AC131212.1-201ENST00000613771 668 ntBASIC21.34■■□□□ 1.01
P04436 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
P04436 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
P04436 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
P04436 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
P04436 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
P04436 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.33■■□□□ 1.01
P04436 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
P04436 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
P04436 AF131216.4-201ENST00000638924 1588 ntBASIC21.33■■□□□ 1.01
P04436 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
P04436 UNC93B8-201ENST00000511903 705 ntBASIC21.33■■□□□ 1.01
P04436 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
P04436 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.32■■□□□ 1
P04436 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
P04436 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.32■■□□□ 1
P04436 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.31■■□□□ 1
P04436 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
P04436 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.31■■□□□ 1
P04436 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
P04436 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.3■■□□□ 1
P04436 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.3■■□□□ 1
P04436 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P04436 MTDHP2-201ENST00000601468 714 ntBASIC21.3■■□□□ 1
P04436 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P04436 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
P04436 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P04436 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
P04436 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P04436 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.29■■□□□ 1
P04436 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P04436 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.29■■□□□ 1
P04436 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.29■■□□□ 1
P04436 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
P04436 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.29■■□□□ 1
P04436 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
P04436 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
P04436 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.28■■□□□ 1
P04436 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
P04436 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.28■■□□□ 1
P04436 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
P04436 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.28■■□□□ 1
P04436 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.28■■□□□ 1
P04436 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.28■■□□□ 1
P04436 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.28■■□□□ 1
P04436 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P04436 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.28■■□□□ 1
P04436 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P04436 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
P04436 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
P04436 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
P04436 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
P04436 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.27■■□□□ 1
P04436 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.27■■□□□ 1
P04436 AC010997.5-201ENST00000609182 354 ntBASIC21.27■■□□□ 1
P04436 MIR6089-201ENST00000616698 64 ntBASIC21.27■■□□□ 1
P04436 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.27■■□□□ 1
P04436 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.27■■□□□ 1
P04436 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.27■■□□□ 1
P04436 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
P04436 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.26■□□□□ 0.99
P04436 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P04436 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.26■□□□□ 0.99
P04436 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P04436 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
P04436 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.26■□□□□ 0.99
P04436 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.26■□□□□ 0.99
P04436 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P04436 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P04436 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P04436 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
P04436 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P04436 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
P04436 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms