Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPP1R3DO95685 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PPP1R3DO95685 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.04■□□□□ 0.96
PPP1R3DO95685 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.04■□□□□ 0.96
PPP1R3DO95685 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.03■□□□□ 0.96
PPP1R3DO95685 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
PPP1R3DO95685 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PPP1R3DO95685 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PPP1R3DO95685 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPP1R3DO95685 AC009831.1-201ENST00000580420 1582 ntBASIC21.03■□□□□ 0.96
PPP1R3DO95685 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PPP1R3DO95685 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPP1R3DO95685 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PPP1R3DO95685 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPP1R3DO95685 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPP1R3DO95685 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PPP1R3DO95685 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3DO95685 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3DO95685 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3DO95685 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.02■□□□□ 0.96
PPP1R3DO95685 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3DO95685 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PPP1R3DO95685 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3DO95685 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.02■□□□□ 0.96
PPP1R3DO95685 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3DO95685 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PPP1R3DO95685 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PPP1R3DO95685 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PPP1R3DO95685 ABCB10P4-201ENST00000566803 2184 ntBASIC21.02■□□□□ 0.95
PPP1R3DO95685 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PPP1R3DO95685 AC133552.2-201ENST00000619106 1032 ntBASIC21.01■□□□□ 0.95
PPP1R3DO95685 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP1R3DO95685 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP1R3DO95685 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.01■□□□□ 0.95
PPP1R3DO95685 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PPP1R3DO95685 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21■□□□□ 0.95
PPP1R3DO95685 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PPP1R3DO95685 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21■□□□□ 0.95
PPP1R3DO95685 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21■□□□□ 0.95
PPP1R3DO95685 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PPP1R3DO95685 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
PPP1R3DO95685 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP1R3DO95685 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.99■□□□□ 0.95
PPP1R3DO95685 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PPP1R3DO95685 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PPP1R3DO95685 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PPP1R3DO95685 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP1R3DO95685 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.98■□□□□ 0.95
PPP1R3DO95685 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP1R3DO95685 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PPP1R3DO95685 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP1R3DO95685 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PPP1R3DO95685 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP1R3DO95685 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3DO95685 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3DO95685 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3DO95685 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3DO95685 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
PPP1R3DO95685 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3DO95685 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.97■□□□□ 0.95
PPP1R3DO95685 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3DO95685 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3DO95685 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP1R3DO95685 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3DO95685 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3DO95685 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3DO95685 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3DO95685 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PPP1R3DO95685 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP1R3DO95685 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.96■□□□□ 0.95
PPP1R3DO95685 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.95■□□□□ 0.94
PPP1R3DO95685 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
PPP1R3DO95685 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PPP1R3DO95685 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP1R3DO95685 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP1R3DO95685 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PPP1R3DO95685 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
PPP1R3DO95685 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3DO95685 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
PPP1R3DO95685 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3DO95685 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3DO95685 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3DO95685 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3DO95685 RNF126P1-201ENST00000567452 1320 ntBASIC20.94■□□□□ 0.94
PPP1R3DO95685 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PPP1R3DO95685 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.93■□□□□ 0.94
PPP1R3DO95685 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.93■□□□□ 0.94
PPP1R3DO95685 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PPP1R3DO95685 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PPP1R3DO95685 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms