Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN4O14493 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.99■■□□□ 1.11
CLDN4O14493 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN4O14493 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN4O14493 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CLDN4O14493 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN4O14493 AC142381.3-201ENST00000568208 1670 ntBASIC21.98■■□□□ 1.11
CLDN4O14493 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN4O14493 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN4O14493 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN4O14493 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CLDN4O14493 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.98■■□□□ 1.11
CLDN4O14493 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN4O14493 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.98■■□□□ 1.11
CLDN4O14493 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN4O14493 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN4O14493 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN4O14493 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN4O14493 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN4O14493 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN4O14493 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN4O14493 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CLDN4O14493 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN4O14493 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN4O14493 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
CLDN4O14493 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.97■■□□□ 1.11
CLDN4O14493 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN4O14493 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN4O14493 AP003733.4-201ENST00000623785 1697 ntBASIC21.96■■□□□ 1.11
CLDN4O14493 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.96■■□□□ 1.11
CLDN4O14493 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.96■■□□□ 1.11
CLDN4O14493 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLDN4O14493 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.96■■□□□ 1.11
CLDN4O14493 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN4O14493 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLDN4O14493 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLDN4O14493 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.95■■□□□ 1.1
CLDN4O14493 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN4O14493 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN4O14493 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN4O14493 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.95■■□□□ 1.1
CLDN4O14493 MIR4281-201ENST00000580852 62 ntBASIC21.95■■□□□ 1.1
CLDN4O14493 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN4O14493 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.95■■□□□ 1.1
CLDN4O14493 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLDN4O14493 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN4O14493 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN4O14493 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.94■■□□□ 1.1
CLDN4O14493 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.94■■□□□ 1.1
CLDN4O14493 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN4O14493 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN4O14493 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.94■■□□□ 1.1
CLDN4O14493 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLDN4O14493 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN4O14493 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN4O14493 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN4O14493 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN4O14493 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLDN4O14493 AL451085.2-201ENST00000605085 799 ntBASIC21.93■■□□□ 1.1
CLDN4O14493 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.92■■□□□ 1.1
CLDN4O14493 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.92■■□□□ 1.1
CLDN4O14493 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CLDN4O14493 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN4O14493 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLDN4O14493 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN4O14493 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN4O14493 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN4O14493 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CLDN4O14493 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.91■■□□□ 1.1
CLDN4O14493 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLDN4O14493 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CLDN4O14493 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.91■■□□□ 1.1
CLDN4O14493 BX664725.1-201ENST00000438252 379 ntBASIC21.91■■□□□ 1.1
CLDN4O14493 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CLDN4O14493 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.91■■□□□ 1.1
CLDN4O14493 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CLDN4O14493 AC009299.2-201ENST00000482477 511 ntBASIC21.9■■□□□ 1.1
CLDN4O14493 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN4O14493 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLDN4O14493 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN4O14493 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN4O14493 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.89■■□□□ 1.09
CLDN4O14493 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.89■■□□□ 1.09
CLDN4O14493 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN4O14493 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLDN4O14493 AC137630.3-201ENST00000607245 391 ntBASIC21.89■■□□□ 1.09
CLDN4O14493 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CLDN4O14493 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CLDN4O14493 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.89■■□□□ 1.09
CLDN4O14493 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.89■■□□□ 1.09
CLDN4O14493 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN4O14493 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN4O14493 Z92544.1-202ENST00000571933 1220 ntBASIC21.88■■□□□ 1.09
CLDN4O14493 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
CLDN4O14493 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CLDN4O14493 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN4O14493 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN4O14493 AC138932.3-201ENST00000567634 1902 ntBASIC21.88■■□□□ 1.09
CLDN4O14493 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.87■■□□□ 1.09
CLDN4O14493 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms