Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 MIR639-201ENST00000384974 98 ntBASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV6-7A0A0A0MS04 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 RP9P-202ENST00000450133 1212 ntBASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 MIR6089-201ENST00000616698 64 ntBASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRBV6-7A0A0A0MS04 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV6-7A0A0A0MS04 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV6-7A0A0A0MS04 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRBV6-7A0A0A0MS04 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV6-7A0A0A0MS04 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRBV6-7A0A0A0MS04 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV6-7A0A0A0MS04 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV6-7A0A0A0MS04 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.52■□□□□ 0.72
TRBV6-7A0A0A0MS04 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.52■□□□□ 0.72
TRBV6-7A0A0A0MS04 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV6-7A0A0A0MS04 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV6-7A0A0A0MS04 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV6-7A0A0A0MS04 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV6-7A0A0A0MS04 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 AC093536.1-201ENST00000569153 554 ntBASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 AC022413.1-201ENST00000624602 984 ntBASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRBV6-7A0A0A0MS04 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV6-7A0A0A0MS04 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV6-7A0A0A0MS04 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV6-7A0A0A0MS04 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRBV6-7A0A0A0MS04 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV6-7A0A0A0MS04 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRBV6-7A0A0A0MS04 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV6-7A0A0A0MS04 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV6-7A0A0A0MS04 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-7A0A0A0MS04 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.47■□□□□ 0.71
TRBV6-7A0A0A0MS04 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV6-7A0A0A0MS04 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV6-7A0A0A0MS04 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV6-7A0A0A0MS04 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.47■□□□□ 0.71
TRBV6-7A0A0A0MS04 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV6-7A0A0A0MS04 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV6-7A0A0A0MS04 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRBV6-7A0A0A0MS04 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV6-7A0A0A0MS04 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 AL117328.2-201ENST00000624617 1940 ntBASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV6-7A0A0A0MS04 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms