Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV1A0A0A0MS02 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV1A0A0A0MS02 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV1A0A0A0MS02 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV1A0A0A0MS02 AL139125.2-201ENST00000623134 1869 ntBASIC16.86■□□□□ 0.29
TRGV1A0A0A0MS02 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV1A0A0A0MS02 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV1A0A0A0MS02 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 AC087393.1-201ENST00000582896 145 ntBASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV1A0A0A0MS02 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRGV1A0A0A0MS02 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV1A0A0A0MS02 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.84■□□□□ 0.29
TRGV1A0A0A0MS02 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV1A0A0A0MS02 AC139795.1-202ENST00000500444 432 ntBASIC16.84■□□□□ 0.29
TRGV1A0A0A0MS02 DUX4L18-201ENST00000553347 1267 ntBASIC16.84■□□□□ 0.29
TRGV1A0A0A0MS02 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRGV1A0A0A0MS02 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV1A0A0A0MS02 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV1A0A0A0MS02 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRGV1A0A0A0MS02 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.83■□□□□ 0.28
TRGV1A0A0A0MS02 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRGV1A0A0A0MS02 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRGV1A0A0A0MS02 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.83■□□□□ 0.28
TRGV1A0A0A0MS02 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 LINC01124-201ENST00000409786 2117 ntBASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 MIR6089-201ENST00000616698 64 ntBASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRGV1A0A0A0MS02 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 AC093323.1-202ENST00000635031 2045 ntBASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 BHLHE23-202ENST00000612929 1109 ntBASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV1A0A0A0MS02 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV1A0A0A0MS02 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.79■□□□□ 0.28
TRGV1A0A0A0MS02 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms