Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.62■■□□□ 1.05
HRH3Q9Y5N1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.62■■□□□ 1.05
HRH3Q9Y5N1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
HRH3Q9Y5N1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
HRH3Q9Y5N1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HRH3Q9Y5N1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HRH3Q9Y5N1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HRH3Q9Y5N1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.61■■□□□ 1.05
HRH3Q9Y5N1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HRH3Q9Y5N1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HRH3Q9Y5N1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HRH3Q9Y5N1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HRH3Q9Y5N1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
HRH3Q9Y5N1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HRH3Q9Y5N1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HRH3Q9Y5N1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HRH3Q9Y5N1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HRH3Q9Y5N1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HRH3Q9Y5N1 KRT18P10-201ENST00000388836 1287 ntBASIC21.6■■□□□ 1.05
HRH3Q9Y5N1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.6■■□□□ 1.05
HRH3Q9Y5N1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HRH3Q9Y5N1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HRH3Q9Y5N1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HRH3Q9Y5N1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HRH3Q9Y5N1 THA1P-201ENST00000590384 1145 ntBASIC21.59■■□□□ 1.05
HRH3Q9Y5N1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HRH3Q9Y5N1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
HRH3Q9Y5N1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.59■■□□□ 1.05
HRH3Q9Y5N1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
HRH3Q9Y5N1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HRH3Q9Y5N1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HRH3Q9Y5N1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.58■■□□□ 1.05
HRH3Q9Y5N1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.58■■□□□ 1.05
HRH3Q9Y5N1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.58■■□□□ 1.05
HRH3Q9Y5N1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HRH3Q9Y5N1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HRH3Q9Y5N1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
HRH3Q9Y5N1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HRH3Q9Y5N1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 AC239859.2-201ENST00000444165 318 ntBASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 AC131212.1-201ENST00000613771 668 ntBASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HRH3Q9Y5N1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HRH3Q9Y5N1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HRH3Q9Y5N1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
HRH3Q9Y5N1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.56■■□□□ 1.04
HRH3Q9Y5N1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.56■■□□□ 1.04
HRH3Q9Y5N1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HRH3Q9Y5N1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HRH3Q9Y5N1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 SLC6A10P-202ENST00000431994 2058 ntBASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 FOXO3B-201ENST00000395675 1928 ntBASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HRH3Q9Y5N1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HRH3Q9Y5N1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.54■■□□□ 1.04
HRH3Q9Y5N1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.54■■□□□ 1.04
HRH3Q9Y5N1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.54■■□□□ 1.04
HRH3Q9Y5N1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HRH3Q9Y5N1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HRH3Q9Y5N1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HRH3Q9Y5N1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HRH3Q9Y5N1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.52■■□□□ 1.04
HRH3Q9Y5N1 AL356441.2-201ENST00000443009 864 ntBASIC21.52■■□□□ 1.04
HRH3Q9Y5N1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HRH3Q9Y5N1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.52■■□□□ 1.04
HRH3Q9Y5N1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HRH3Q9Y5N1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HRH3Q9Y5N1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HRH3Q9Y5N1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.51■■□□□ 1.03
HRH3Q9Y5N1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HRH3Q9Y5N1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HRH3Q9Y5N1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.51■■□□□ 1.03
HRH3Q9Y5N1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.51■■□□□ 1.03
HRH3Q9Y5N1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HRH3Q9Y5N1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HRH3Q9Y5N1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms