Protein–RNA interactions for Protein: Q9UK45

LSM7, U6 snRNA-associated Sm-like protein LSm7, humanhuman

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7Q9UK45 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.34■■□□□ 1.49
LSM7Q9UK45 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LSM7Q9UK45 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.34■■□□□ 1.49
LSM7Q9UK45 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.34■■□□□ 1.49
LSM7Q9UK45 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LSM7Q9UK45 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSM7Q9UK45 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.34■■□□□ 1.49
LSM7Q9UK45 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSM7Q9UK45 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
LSM7Q9UK45 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
LSM7Q9UK45 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LSM7Q9UK45 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
LSM7Q9UK45 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.33■■□□□ 1.49
LSM7Q9UK45 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LSM7Q9UK45 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
LSM7Q9UK45 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.33■■□□□ 1.49
LSM7Q9UK45 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.33■■□□□ 1.49
LSM7Q9UK45 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LSM7Q9UK45 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.33■■□□□ 1.48
LSM7Q9UK45 AC090877.2-201ENST00000558441 1738 ntBASIC24.32■■□□□ 1.48
LSM7Q9UK45 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LSM7Q9UK45 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
LSM7Q9UK45 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.32■■□□□ 1.48
LSM7Q9UK45 TSPY9P-201ENST00000440215 945 ntBASIC24.32■■□□□ 1.48
LSM7Q9UK45 TSPY11P-201ENST00000442607 1045 ntBASIC24.32■■□□□ 1.48
LSM7Q9UK45 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LSM7Q9UK45 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.32■■□□□ 1.48
LSM7Q9UK45 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LSM7Q9UK45 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.31■■□□□ 1.48
LSM7Q9UK45 UNC93B8-201ENST00000511903 705 ntBASIC24.31■■□□□ 1.48
LSM7Q9UK45 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.31■■□□□ 1.48
LSM7Q9UK45 AC092028.1-203ENST00000608262 953 ntBASIC24.31■■□□□ 1.48
LSM7Q9UK45 DUSP8P4-201ENST00000399538 1761 ntBASIC24.31■■□□□ 1.48
LSM7Q9UK45 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LSM7Q9UK45 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
LSM7Q9UK45 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.3■■□□□ 1.48
LSM7Q9UK45 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LSM7Q9UK45 KRT16P3-201ENST00000439127 1283 ntBASIC24.3■■□□□ 1.48
LSM7Q9UK45 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LSM7Q9UK45 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LSM7Q9UK45 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.29■■□□□ 1.48
LSM7Q9UK45 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.29■■□□□ 1.48
LSM7Q9UK45 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LSM7Q9UK45 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
LSM7Q9UK45 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.28■■□□□ 1.48
LSM7Q9UK45 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
LSM7Q9UK45 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
LSM7Q9UK45 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.28■■□□□ 1.48
LSM7Q9UK45 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
LSM7Q9UK45 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LSM7Q9UK45 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LSM7Q9UK45 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
LSM7Q9UK45 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.27■■□□□ 1.48
LSM7Q9UK45 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
LSM7Q9UK45 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
LSM7Q9UK45 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LSM7Q9UK45 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LSM7Q9UK45 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LSM7Q9UK45 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSM7Q9UK45 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSM7Q9UK45 AC091060.1-201ENST00000623524 1766 ntBASIC24.26■■□□□ 1.47
LSM7Q9UK45 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.26■■□□□ 1.47
LSM7Q9UK45 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
LSM7Q9UK45 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSM7Q9UK45 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.26■■□□□ 1.47
LSM7Q9UK45 AC145676.1-201ENST00000514988 2004 ntBASIC24.26■■□□□ 1.47
LSM7Q9UK45 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LSM7Q9UK45 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.25■■□□□ 1.47
LSM7Q9UK45 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.25■■□□□ 1.47
LSM7Q9UK45 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LSM7Q9UK45 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.25■■□□□ 1.47
LSM7Q9UK45 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.25■■□□□ 1.47
LSM7Q9UK45 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.24■■□□□ 1.47
LSM7Q9UK45 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.24■■□□□ 1.47
LSM7Q9UK45 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.24■■□□□ 1.47
LSM7Q9UK45 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LSM7Q9UK45 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LSM7Q9UK45 MTDHP2-201ENST00000601468 714 ntBASIC24.23■■□□□ 1.47
LSM7Q9UK45 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LSM7Q9UK45 AF131216.4-201ENST00000638924 1588 ntBASIC24.23■■□□□ 1.47
LSM7Q9UK45 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
LSM7Q9UK45 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.22■■□□□ 1.47
LSM7Q9UK45 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.22■■□□□ 1.47
LSM7Q9UK45 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LSM7Q9UK45 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
LSM7Q9UK45 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.22■■□□□ 1.47
LSM7Q9UK45 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
LSM7Q9UK45 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.22■■□□□ 1.47
LSM7Q9UK45 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.22■■□□□ 1.47
LSM7Q9UK45 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
LSM7Q9UK45 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
LSM7Q9UK45 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LSM7Q9UK45 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.21■■□□□ 1.47
LSM7Q9UK45 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.21■■□□□ 1.47
LSM7Q9UK45 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.21■■□□□ 1.47
LSM7Q9UK45 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LSM7Q9UK45 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.21■■□□□ 1.47
LSM7Q9UK45 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
LSM7Q9UK45 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
LSM7Q9UK45 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms