Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PCDH15Q96QU1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.23■■□□□ 1.31
PCDH15Q96QU1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PCDH15Q96QU1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.23■■□□□ 1.31
PCDH15Q96QU1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDH15Q96QU1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH15Q96QU1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH15Q96QU1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.23■■□□□ 1.31
PCDH15Q96QU1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PCDH15Q96QU1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH15Q96QU1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.22■■□□□ 1.31
PCDH15Q96QU1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH15Q96QU1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH15Q96QU1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH15Q96QU1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDH15Q96QU1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH15Q96QU1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH15Q96QU1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.21■■□□□ 1.31
PCDH15Q96QU1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH15Q96QU1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
PCDH15Q96QU1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH15Q96QU1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH15Q96QU1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
PCDH15Q96QU1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH15Q96QU1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDH15Q96QU1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH15Q96QU1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.2■■□□□ 1.3
PCDH15Q96QU1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH15Q96QU1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
PCDH15Q96QU1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH15Q96QU1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH15Q96QU1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH15Q96QU1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH15Q96QU1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH15Q96QU1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDH15Q96QU1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH15Q96QU1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDH15Q96QU1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PCDH15Q96QU1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH15Q96QU1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH15Q96QU1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH15Q96QU1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDH15Q96QU1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.17■■□□□ 1.3
PCDH15Q96QU1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH15Q96QU1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 AC142381.2-201ENST00000566120 298 ntBASIC23.15■■□□□ 1.3
PCDH15Q96QU1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 AC135279.3-201ENST00000610945 1311 ntBASIC23.15■■□□□ 1.3
PCDH15Q96QU1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDH15Q96QU1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
PCDH15Q96QU1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.14■■□□□ 1.3
PCDH15Q96QU1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.14■■□□□ 1.3
PCDH15Q96QU1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.14■■□□□ 1.3
PCDH15Q96QU1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PCDH15Q96QU1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH15Q96QU1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH15Q96QU1 PBX2P1-201ENST00000493219 1291 ntBASIC23.14■■□□□ 1.29
PCDH15Q96QU1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH15Q96QU1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH15Q96QU1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.13■■□□□ 1.29
PCDH15Q96QU1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDH15Q96QU1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH15Q96QU1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PCDH15Q96QU1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH15Q96QU1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH15Q96QU1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDH15Q96QU1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDH15Q96QU1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH15Q96QU1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH15Q96QU1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH15Q96QU1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH15Q96QU1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH15Q96QU1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH15Q96QU1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH15Q96QU1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PCDH15Q96QU1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.1■■□□□ 1.29
PCDH15Q96QU1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH15Q96QU1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH15Q96QU1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH15Q96QU1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH15Q96QU1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
PCDH15Q96QU1 AC104564.3-201ENST00000582367 638 ntBASIC23.09■■□□□ 1.29
PCDH15Q96QU1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH15Q96QU1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms